Pairwise Alignments

Query, 638 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 465 a.a., U32 family peptidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  125 bits (313), Expect = 5e-33
 Identities = 127/454 (27%), Positives = 194/454 (42%), Gaps = 83/454 (18%)

Query: 20  ELLAPA---KNADYGIEAIRHGADAVYIGGPAFGARATAGN-SVEDIARLCTFAHKYHAQ 75
           ELL+PA   KN  Y   A  +GADAVY G P +  R    +  +E++      AH    +
Sbjct: 5   ELLSPAGTLKNMRY---AFAYGADAVYAGQPRYSLRVRNNDFKLENLKTGIEEAHSLGKK 61

Query: 76  VFVALNTILMDDELAVAEKLIWDVYNAGADALIVQDMGVLQL---NLPPIALHASTQMDN 132
           ++V  N    + +L      +  V     DALI+ D G++ +     P   +H S Q + 
Sbjct: 62  LYVVSNIAPHNAKLKTYLDDMAPVVAMKPDALIMSDPGLIMMVREAFPDQVVHLSVQANA 121

Query: 133 RNPEKVAFLEQVGFSQVVLARELGLSQIREVAAHT-NMQIEFFIHGALCVAYSGLCNLSH 191
            N   V F + VG  +V+L+REL L +I E+     ++++E F+HGALC+AYSG C LS 
Sbjct: 122 INWASVKFWQSVGIKRVILSRELSLDEIEEIRQRCPDIELEVFVHGALCMAYSGRCLLSG 181

Query: 192 AFSNRSANRGECSQMCRLPGN----LKTRQGDVLA------------------------- 222
             + R  N+G C+  CR   +     +   GDV+A                         
Sbjct: 182 YINKRDPNQGTCTNACRWKYDAHEATENEAGDVVAIHTPESAVQLETPTLGNGPATDKIF 241

Query: 223 ---------------KNEH---LLSLKDNNQTDNLEALIDAGVRSFKIEGRLKDLSYVKN 264
                          ++EH   +++ KD     ++E L   GV S KIEGR K   YV  
Sbjct: 242 LLQEENRPGEYMPAFEDEHGTYIMNSKDLRAIQHVERLAKIGVDSLKIEGRTKSFYYVAR 301

Query: 265 VTAHYRQKLDAIMARRPEFVASSHGRTEHTFTPDPEKTFNRGSTDYF----VHERSQ--- 317
               YRQ ++  +A R        G   H  T   E   +RG T+ F    VH+  Q   
Sbjct: 302 TAQLYRQAIEDAVAGR--------GFDPHLMT-RLEGLAHRGYTEGFLRRHVHDEYQNYD 352

Query: 318 -GIKDFRSPKYIGQDVGKVVAIGKDFIQVSSTHEFNNGDGLAYFPP----NYAMAKQSDD 372
            G     S +++G+  GK    G    ++   ++F  GD +    P    N  +    + 
Sbjct: 353 YGYSISDSQQFVGEFTGKRNEAG--LAEIDVKNKFIVGDSVELMTPQGNINLTVDTLYNR 410

Query: 373 KLQGLRVNRAEGHKLHVLQVPRDLRVGM-TLYRN 405
           K + +      GH ++ L VP ++ V M  L RN
Sbjct: 411 KGEAVDAGLGSGHMVY-LPVPAEVDVNMGVLLRN 443