Pairwise Alignments

Query, 638 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 628 a.a., collagenase-like protease from Dechlorosoma suillum PS

 Score =  670 bits (1729), Expect = 0.0
 Identities = 348/631 (55%), Positives = 447/631 (70%), Gaps = 17/631 (2%)

Query: 9   PEKLSHVNNRLELLAPAKNADYGIEAIRHGADAVYIGGPAFGARATAGNSVEDIARLCTF 68
           P  L+H    LELLAPAKNAD+G+EAI HGADAVYIGGPAFGARA AGNSV DIA L  F
Sbjct: 2   PHPLAHP---LELLAPAKNADFGMEAIVHGADAVYIGGPAFGARANAGNSVADIAGLSEF 58

Query: 69  AHKYHAQVFVALNTILMDDELAVAEKLIWDVYNAGADALIVQDMGVLQLNLPPIALHAST 128
           AH+Y+A+V VALNTIL D+EL  A ++ W+ ++AGADALI+QDMG+LQL+LPPI LHAST
Sbjct: 59  AHRYNARVLVALNTILKDEELETARRIAWECHDAGADALIIQDMGLLQLDLPPIQLHAST 118

Query: 129 QMDNRNPEKVAFLEQVGFSQVVLARELGLSQIREVAAHTNMQIEFFIHGALCVAYSGLCN 188
           Q D R+ +K  FL+ VGFSQ+VLAREL L Q+R++AA T++ +EFF+HGALCV+YSGLCN
Sbjct: 119 QTDIRSVDKARFLQDVGFSQIVLARELDLEQVRQIAAQTDIALEFFVHGALCVSYSGLCN 178

Query: 189 LSHAFSNRSANRGECSQMCRLPGNLKTRQGDVLAKNEHLLSLKDNNQTDNLEALIDAGVR 248
           +SHA + RSANRGECSQ CRLP +L+  QG ++A ++HLLS+KDN+Q+ NL AL  AG+ 
Sbjct: 179 ISHAHTGRSANRGECSQACRLPYDLENEQGQIIASDKHLLSMKDNDQSANLLALAQAGIS 238

Query: 249 SFKIEGRLKDLSYVKNVTAHYRQKLDAIMARRPEFVASSHGRTEHTFTPDPEKTFNRGST 308
           SFKIEGRLKDLSYVKN+TAHYR  LD I+A+ P+F  SS GR+   FTP PEKTFNRG+T
Sbjct: 239 SFKIEGRLKDLSYVKNITAHYRTLLDGILAQHPQFTRSSAGRSTFFFTPQPEKTFNRGAT 298

Query: 309 DYFVHERSQG-IKDFRSPKYIGQDVGKVVAIGKDFIQVSSTHEFNNGDGLAYFPPNYAMA 367
           DYFVH R    +  F +P + G  +GKV  +GK + +V +    +NGDGL+YF       
Sbjct: 299 DYFVHGRGHSEVGAFDTPAFSGPAIGKVSRLGKGWFEVETAEALHNGDGLSYF------- 351

Query: 368 KQSDDKLQGLRVNRAE----GHKLHVLQVPRDLRVGMTLYRNHNQAFEALLAKESAKRII 423
                +L GLR+N AE      +    +VP DL VG  ++RN +Q FE +L K+SA+R +
Sbjct: 352 -DGHGELVGLRLNTAEKVGAAWRCTPNEVPADLAVGTAIHRNRDQEFERILEKKSAERRV 410

Query: 424 AVDMRLIDTTAGVALTLTDMYGLSASVELAVEKTPATDAEKTLQTIRTQLSKLGSTDFVA 483
            + M   ++  G ALTLTD  G++ SV LA  K  A + E+ L  +R  L+KLG+T +VA
Sbjct: 411 GITMVFAESGDGFALTLTDETGIAVSVPLAHAKEAAQNGERALAGLRENLAKLGNTLYVA 470

Query: 484 RQISIETAEPWFLPASTLNGLRRDAVAALELARIEGYQR-PKPWKYNQDAVYPFKHLSYL 542
             + ++ ++PWFLPA  +N LRR+AVAAL+ AR   YQR P+       A+YP   L+YL
Sbjct: 471 DGVELQLSQPWFLPAGAINALRREAVAALDTARAAAYQRPPRARPVEPPALYPEVELTYL 530

Query: 543 GNVANEKAKDFYQRHGVIEIQDTYEKNGVTEDVPLMVTKHCLRFNFNLCPKEVPGIKADP 602
           GNV N KA++FY +HGV  I   YE +     V LM+TKHCLR +FNLCPKEV G+K DP
Sbjct: 531 GNVYNRKAREFYLKHGVELIAAAYEADEEKGAVSLMITKHCLRHSFNLCPKEVKGLKPDP 590

Query: 603 MVLEIGNDVLKLVFDCPKCEMLVVGENRQVR 633
           + L    + L L FDC KCEM VVG+ R+ R
Sbjct: 591 LTLVNNGERLTLKFDCVKCEMHVVGKMRKNR 621