Pairwise Alignments

Query, 250 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 250 a.a., abortive infection protein (RefSeq) from Shewanella sp. ANA-3

 Score =  386 bits (991), Expect = e-112
 Identities = 187/250 (74%), Positives = 216/250 (86%)

Query: 1   MDVKAFQLGKILFCTGFLGVISIIPFVSTLLGPHSVQLDIPIYLLTLLMVIQSSFMLVLM 60
           MDVK ++  K+LF  GFLG+ISIIPF+S LL  HS+QL IP++LL LL VIQSS MLVLM
Sbjct: 1   MDVKTWRFNKLLFSFGFLGIISIIPFISKLLETHSIQLAIPVFLLVLLTVIQSSLMLVLM 60

Query: 61  VFIGVIFSRKVGLFAPVFAAYAEGGNIYHALKPQFIPALIGGVLGGLFLLCFMEIVVGNL 120
           +FIG IFS KVGL APV AAYAEG   Y  LK Q IPA+IGGVLGGLF+L FM ++VG L
Sbjct: 61  MFIGSIFSSKVGLHAPVIAAYAEGQKPYSILKSQVIPAVIGGVLGGLFVLGFMVVLVGYL 120

Query: 121 PQDFIQAGEKLTPPWYAKVVYGGITEEILIRWGLMSFITWCCYRLTQAKETVIQPYNYIF 180
           P+DFI+AGEK TPPWY+KV+YGGITEEILIRWGLMSF+TWCCYRLTQAK +VIQ +NY+F
Sbjct: 121 PEDFIRAGEKFTPPWYSKVIYGGITEEILIRWGLMSFLTWCCYRLTQAKNSVIQSHNYLF 180

Query: 181 AIVISAFLFGIGHLPVAFALTSEVNSALIFYIIFGNAGFGFVAGYLYWKRGLECAMLAHI 240
           AIV+SAFLFG+GHLPVAFAL+SEVN AL+ YIIFGNAGFG +AGYLYWKRGLECA+ AH+
Sbjct: 181 AIVLSAFLFGVGHLPVAFALSSEVNLALVVYIIFGNAGFGLIAGYLYWKRGLECAIGAHM 240

Query: 241 IAHLIITSFL 250
           IAHL+I SFL
Sbjct: 241 IAHLVILSFL 250