Pairwise Alignments

Query, 390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 410 a.a., FIG01211758: hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 61.6 bits (148), Expect = 4e-14
 Identities = 92/388 (23%), Positives = 145/388 (37%), Gaps = 67/388 (17%)

Query: 7   ISNYRTLREIVL----------PLGRLNVVTGANGSGKSNLYKALRLLAQTAQGGVVNAL 56
           + NYR LR+I L          PL    VV G NG GKS L+ A   +A      V +A 
Sbjct: 9   VRNYRALRDITLGRLSAEQQGDPLTPFTVVIGKNGVGKSTLFDAFGFVADCLSKDVESAC 68

Query: 57  --ALEGGLDSCFWAGPENLTKGMLAGDTPIEATVRQAPKRLKLGFAGEDFSYLIELGLPK 114
                GG +     G E   +         +   R+A     + +  E    L   G P 
Sbjct: 69  DDKQRGGFERMRSLGTEESIR--------FDIYYREAKGERPITY--ELAINLDSSGRPF 118

Query: 115 PDSTTLFGLDPQIKREAIWNGAKYRPASVLVERRGPMVKSRSQDGQGWITLSAHLQSS-- 172
            +S  L     + +R+   +G  Y           P ++     G+ W    A   SS  
Sbjct: 119 VESEVL-----KQRRKGQKHGRPY-----------PFLRLHHGVGKVWAGEEAVETSSGE 162

Query: 173 ------DSIFTELADP--------ERSPEVLKLRDSIRAWRFYDHFRTDTDAPARRPQLG 218
                 D   T+L           +  P + + RD ++ W    +F  D+   AR     
Sbjct: 163 EDRAQEDVELTDLRQLGIATLGTLKEHPRIKRFRDFLKGWHL-SYFHPDS---ARSIPSA 218

Query: 219 TATPVLHHDGRDLPSAIQTIFEIGDKSAFD---HAVSDAFPGA-KVRITPQAGGILQLEF 274
            A   L   G ++ + +Q + E   K  F      ++   PG   +R T      + L+F
Sbjct: 219 GAQRHLDVHGENIGNVVQYM-EREHKERFKTILDRIAAKIPGVHSIRTTVTQDKRVLLQF 277

Query: 275 QQQGLLRPLYASELSDGTLRYLLLIAALLTPRPPELMVLNEPETSLHPDLLPALARLIAK 334
                  P YA ++SDGTL+    +  +  P PP  + + EPE  L+  LL +LA  +  
Sbjct: 278 NDGAFNDPFYAGQMSDGTLKIFAYLLLMEDPEPPPFICIEEPENGLYHRLLDSLASELRS 337

Query: 335 ----ASEVCQLWVVSHANRLINALNQFE 358
                    Q++V +H    ++AL+  E
Sbjct: 338 HATGKKNAPQIFVTTHQPYFVDALSTKE 365