Pairwise Alignments

Query, 390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 374 a.a., DUF3696 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 91/396 (22%), Positives = 146/396 (36%), Gaps = 73/396 (18%)

Query: 1   MLTTLAISNYRTLREIVLPLGRLNVVTGANGSGKSNLYKALRLLAQTAQGGVVNALALEG 60
           M+  + + N++  +  +  L  L V  G N SGKS + ++L L+ Q       N L L G
Sbjct: 1   MINEVTLRNFKCYKNQLFELANLTVFCGNNSSGKSTVIQSLLLILQN---NFSNKLELRG 57

Query: 61  GLDSCFWAGPENLTKGMLAGDTPIEATVRQAPKRLKLGFAGEDFSY-----LIELGLPK- 114
                   G  N      A +  +   +  +   +  G++ ++FS      + E  LP  
Sbjct: 58  DYVQ---PGSYNDLHNRNADEDSLSILIDTSVGAVSWGYSEDEFSSQKRKEVEEAPLPLL 114

Query: 115 --PDSTTLFGLDPQIKREAIWNGAKYRPASVLVERRGPMVK---SRSQDGQGWITLSAHL 169
              D T L  L    + E I+  A         ER GP      S  +  Q W+  +   
Sbjct: 115 DFSDKTVLHKLRELYEDEFIYLHA---------ERWGPRSSYPYSTRRRSQNWLGTNG-- 163

Query: 170 QSSDSIFTELADPERSPEVLKLRDSIRAWRFYDHFRTDTDAPAR-RPQLGTATPVLHHDG 228
                        E +P+VL+L           + +T      R  P L   + V     
Sbjct: 164 -------------EYAPQVLEL--------VVKNIQTMPSDDVRIHPNLTDGSVV----- 197

Query: 229 RDLPSAIQTIFE-IGDKSAFDHAVSDAFPGAKVRITPQAGGILQLEFQQQGLLRPLYASE 287
                  Q +FE +G+ S      + AF  A +       G         G         
Sbjct: 198 ----GIAQNLFEWMGEISPGVFIKAQAFKHADITTNQYTFGGESYRAVNVGF-------- 245

Query: 288 LSDGTLRYLLLIAALLTPRPPELMVLNEPETSLHPDLLPALARLIAKASEV-CQLWVVSH 346
              G    L ++ ALL  +P  L+++  PE  LHP     L RLIA A+E   Q+ V +H
Sbjct: 246 ---GLSYVLPIVLALLVTKPGGLVIIENPEAHLHPRGQSYLGRLIALAAEAGVQVVVETH 302

Query: 347 ANRLINALNQFEECNTLALDKTLGQTQILGQDLLNT 382
           ++ +IN +        +  DK L   Q++ +D+  T
Sbjct: 303 SDHIINGIRLMPRLGKVQ-DKNLLFYQVINEDVGTT 337