Pairwise Alignments

Query, 390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 394 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  118 bits (295), Expect = 3e-31
 Identities = 112/402 (27%), Positives = 173/402 (43%), Gaps = 36/402 (8%)

Query: 1   MLTTLAISNYRTLREIV--LPLGRLNVVTGANGSGKSNLYKALRLLAQTAQGGVVNALAL 58
           ++ ++ ++N  +  E    + L  LNVV G NGSGKSNL  A+ L     +         
Sbjct: 2   LIKSIKLTNILSFGEAAETIELRPLNVVIGPNGSGKSNLIAAIELFRALPKDAPA-FFRR 60

Query: 59  EGGLDSCFWAGPENLTKGMLAGDTPIEATVRQAPKRLKLGFAGEDFSYLIELGLPKPDST 118
           EGG+    W G E      +      +  +      L+    G+ F  + E         
Sbjct: 61  EGGIHDWLWKGGEIPPVATIESVFDEKGPLSGLRYALRFTVVGQHFEIIEE--------- 111

Query: 119 TLFGLDPQIKREAIWNGAKYRPASVLVERRGPMVKSRSQDGQ--GW-ITLSAHLQSSDSI 175
                  +I+ EA   GA+  P     + RG +    + +G+   W   + + +  + SI
Sbjct: 112 -------RIEEEAA-EGAQTPPPYHFKDGRGALRALLANEGEIKAWSFVIPSEIDPTQSI 163

Query: 176 FTELADPERSPEVLKLRDSIRAWRFYDHFRTDTDAPARRPQLGTATPVLHHDGRDLPSA- 234
             +  DP + PE+  L   +   R Y  +     +P R+ Q       L +D  D   A 
Sbjct: 164 LAQRKDPHQYPELTSLGAVLPTMRCYREWTMGPQSPPRQDQKTD----LRNDYLDPYGAG 219

Query: 235 --IQTIFEIGDKSA----FDHAVSDAFPGAKVRITPQAGGILQLEFQQQGLLRPLYASEL 288
                +  +G+K A    F  A+   + G         GG  Q+ F + G    + AS L
Sbjct: 220 NLALVLQRLGNKPALKKRFLEALRLLYEGIDDYGVTIEGGTSQIFFHEGGRFT-IPASRL 278

Query: 289 SDGTLRYLLLIAALLTPRPPELMVLNEPETSLHPDLLPALARLIAKASEVCQLWVVSHAN 348
           SDGTLRYL L+A LL P PP L+ + EPE  LHPD+LP LA L+ +ASE  Q+ V +H++
Sbjct: 279 SDGTLRYLCLLAILLDPAPPPLLCIEEPELGLHPDILPTLADLLKEASERTQVIVTTHSD 338

Query: 349 RLINALNQFEECNTLALDKTLGQTQILGQDLLNTPSWLWQNR 390
            L++A+    E   L  +K    T +   D      WL + R
Sbjct: 339 GLVDAMTDRPEA-VLIAEKNENGTTLTRLDGETLKPWLAKYR 379