Pairwise Alignments

Query, 390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 388 a.a., AAA family ATPase from Rhodopseudomonas palustris CGA009

 Score =  399 bits (1026), Expect = e-116
 Identities = 213/393 (54%), Positives = 268/393 (68%), Gaps = 8/393 (2%)

Query: 1   MLTTLAISNYRTLREIVLPLGRLNVVTGANGSGKSNLYKALRLLAQTAQGGVVNALALEG 60
           M+T LA+S YR+LR++ L LG LNVVTGANG+GKS+LY+ALRLLA+ AQG V+ +LA EG
Sbjct: 1   MITRLAVSGYRSLRDVRLSLGPLNVVTGANGTGKSSLYRALRLLAEIAQGRVIQSLAAEG 60

Query: 61  GLDSCFWAGPENLTKGMLAGDTPIEATVRQAPKRLKLGFAGEDFSYLIELGLPKPDS--- 117
           GL S  WAGPE L++ M  G  P++ T R     LKLGFAG D+ Y I+LGLP P     
Sbjct: 61  GLPSTLWAGPETLSRTMKRGVHPVQGTTRSTRVALKLGFAGPDYGYAIDLGLPPPPDGPR 120

Query: 118 TTLFGLDPQIKREAIWNGAKYRPASVLVERRGPMVKSRSQDGQGWITLSAHLQSSDSIFT 177
            + F  DP+IK E++W G     A+   ERRGP V+ R   GQ W  +   L  +DS+ T
Sbjct: 121 ASRFTRDPEIKVESVWTGELLGRANAFAERRGPFVRVRDDGGQ-WREVYRSLSPADSMMT 179

Query: 178 ELADPERSPEVLKLRDSIRAWRFYDHFRTDTDAPARRPQLGTATPVLHHDGRDLPSAIQT 237
             ADP  + E+L LRD +R WRFYD  RTD DAPARRPQ+GT TPVL  DG DL +AIQT
Sbjct: 180 HGADPREALELLLLRDRMRDWRFYDQLRTDRDAPARRPQIGTRTPVLGGDGADLAAAIQT 239

Query: 238 IFEIGDKSAFDHAVSDAFPGAKVRITPQAGGILQLEFQQQGLLRPLYASELSDGTLRYLL 297
           I EIGD  A    + DAFP A++ ++ +A G  +L  +Q GLLRPL A+ELSDGTLRYLL
Sbjct: 240 ILEIGDHEALATTIDDAFPRARLEVS-EADGYFELAMEQHGLLRPLKAAELSDGTLRYLL 298

Query: 298 LIAALLTPRPPELMVLNEPETSLHPDLLPALARLIAKASEVCQLWVVSHANRLINALNQF 357
           L+AALL+PRPPELM+LNEPE SLHPDLL  LARLIA A+   Q+ VVSHA+ L++AL + 
Sbjct: 299 LVAALLSPRPPELMILNEPEASLHPDLLAPLARLIAAAATRSQIVVVSHADGLVSALRRE 358

Query: 358 EECNTLALDKTLGQTQILGQDLLNTPSWLWQNR 390
            +   + L+K L +T +   +    PSW W  R
Sbjct: 359 ADSREIVLEKELSETLVRDGE---RPSWNWPAR 388