Pairwise Alignments

Query, 390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 368 a.a., AAA family ATPase from Pantoea sp. MT58

 Score =  296 bits (759), Expect = 5e-85
 Identities = 160/371 (43%), Positives = 227/371 (61%), Gaps = 15/371 (4%)

Query: 5   LAISNYRTLREIVLPLGRLNVVTGANGSGKSNLYKALRLLAQTAQGGVVNALALEGGLDS 64
           + I  +R++R + L L +LNVV+G NG GKSNLYKA+RLL + A G +  ALA EGG+  
Sbjct: 6   IQIRGFRSIRNLTLSLQQLNVVSGPNGCGKSNLYKAVRLLHEAASGRLALALAEEGGIQK 65

Query: 65  CFWAGPENLTKGMLAGDTPIEATVRQAPKRLKLGFAGEDFSYLIELGLPKPDSTTLFGLD 124
             WAG      G+  GD       R  PKRL+L    +D  Y +E+G P+P ST+LF LD
Sbjct: 66  AMWAG------GLRRGDR------RHDPKRLELAVVMDDMDYQLEIGFPEPLSTSLFNLD 113

Query: 125 PQIKREAIW-NGAKYRPASVLVERRGPMVKSRSQDGQGWITLSAHLQSSDSIFTELADPE 183
           P +K+E +W +G + RP++ +++R        + +G+  +   A L   +S+F +L +P 
Sbjct: 114 PLLKQERLWLSGQRRRPSACIMQRENQTAFLHNVEGER-VAYPAVLHPEESLFGQLGEPH 172

Query: 184 RSPEVLKLRDSIRAWRFYDHFRTDTDAPARRPQLGTATPVLHHDGRDLPSAIQTIFEIGD 243
             PE+ +LR+ ++ WRFY  F     +P R PQ+G   PVL HDGR+L +A  TI E G 
Sbjct: 173 LYPELSQLRERLQQWRFYHEFAVWPGSPIRAPQIGVRAPVLAHDGRNLAAAWATIVERGH 232

Query: 244 KSAFDHAVSDAFPGAKVRITPQAGGILQLEFQQQGLLRPLYASELSDGTLRYLLLIAALL 303
                  ++ AFP  +  +  Q  G  Q+   + G+LRPL ++E SDGTLR+L L+ ALL
Sbjct: 233 SELLFEVMAQAFPDCQFDVEVQ-NGRFQMLMSRHGILRPLESAEFSDGTLRFLCLVVALL 291

Query: 304 TPRPPELMVLNEPETSLHPDLLPALARLIAKASEVCQLWVVSHANRLINALNQFEECNTL 363
           +PRPP  M LNEPE SLH DLLPALARLIA+ASE  QLW+ SH+ RL   + Q    N +
Sbjct: 292 SPRPPAFMALNEPENSLHEDLLPALARLIAEASEYSQLWITSHSPRLATLIAQHTAVNHI 351

Query: 364 ALDKTLGQTQI 374
           AL++  G+T++
Sbjct: 352 ALEQREGETRV 362