Pairwise Alignments

Query, 990 a.a., glutamate-ammonia-ligase adenylyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 947 a.a., bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase from Rhodanobacter denitrificans MT42

 Score =  556 bits (1434), Expect = e-162
 Identities = 329/851 (38%), Positives = 479/851 (56%), Gaps = 19/851 (2%)

Query: 75  AAQQQELKTVLGLSDYIANQLTRSPEWINALFADDLQQVERKLFDAQLREQLASATTEDM 134
           A   + ++  L  SD+  +   R P+ +     + L    R   DA  R        ++ 
Sbjct: 35  AGVAERIRRTLLASDFAFDVWCRQPQLLAPAGLERL----RSGSDASARSDALKLPADEA 90

Query: 135 A-KRLLRRFRNYQMVRFAWRDFLDYASLEESLLDLSALAEALVIGARDWLYKEMCVQYGT 193
           A   +LRRFR+ + +R  +RD      L E+L   S L E L+  A  W  + +  +YG 
Sbjct: 91  ACMTVLRRFRHAEALRLVFRDVNALDELPETLSATSVLYEVLLELALGWSERALAARYGA 150

Query: 194 PMDKAGNPQPLLILGMGKLGGRELNFSSDIDLIFTFPEHGETVGGRRSLDNQQFFIRMGQ 253
             D  G  Q LL++G GKLGG ELNFSSDIDL+F +P+ G +  G R+LDN ++F+R+G+
Sbjct: 151 SRDHDGALQRLLVIGFGKLGGSELNFSSDIDLVFAYPQGGHS-DGARALDNSEYFVRLGR 209

Query: 254 RLVNLLDQITVDGFVFRVDMRLRPYGESGPLVVSFSGLEDYYQEQGRDWERYAMVKARSL 313
           +LV LL++ T+DG   RVD+RLRP+G +G L +SF  +E YYQ +GRDWERYA +KAR +
Sbjct: 210 QLVRLLNEPTMDGICARVDLRLRPFGNAGRLALSFVAMEQYYQNEGRDWERYAWIKARPV 269

Query: 314 GPWNHFSDELHSLLRPFVYRRYIDFSAIESLRKMKQLIAQEVRRRQLTDNIKLGAGGIRE 373
                   +L  LLRPFVYR+Y+D++A   LR+MK LI  EV R+ L DN+KLGAGGIRE
Sbjct: 270 AGDRAAGKQLQELLRPFVYRKYLDYTAFAGLREMKALIDAEVARKDLADNLKLGAGGIRE 329

Query: 374 VEFVVQSFQLIRGGREPSLRQQSLFGAMDTLYSLGQFEYLAVDELKHSYLLLRRVENLLQ 433
           +EF+VQ  QLIRGGREPSLR + L GA+    + G         L+ +Y+LLRRVEN +Q
Sbjct: 330 IEFIVQLTQLIRGGREPSLRVRGLLGALTACEARGHIGAARARMLREAYVLLRRVENRVQ 389

Query: 434 AIDDKQTQTLPNNALDWARLCYVLDMTNEIDLRTHIEAAMAKIHRHFKATV---GGEEGE 490
            + D QT  +P +AL   R+   LD  +   L   +    A +   F A +   GG    
Sbjct: 390 MLRDAQTHDVPADALSRERIALSLDYPDWDSLHAALAKQRASVSEEFAAVLMPQGGRAAR 449

Query: 491 EKAEHWTAQLWNVQQDD--HAINLLAEQQIDDDKLWPLLSRWRETVTKRSIGPRGRETLD 548
             A      LW    D+   A  L A      D+L   L +  +    R++ PR RE LD
Sbjct: 450 VPAADLV--LWQRACDESLEAATLEASGFAPGDELADALLKLPQAAAVRAMSPRSRERLD 507

Query: 549 KLMPRLLDELLNQPSPSAAFEPVSKVLEQILTRTTYLELLCENPGARQQLVSLCCASPWI 608
            LMP+L D      +P  +   + ++++ +  R++YL LL E P AR++LV L   S ++
Sbjct: 508 HLMPQLFDAARATTAPVPSLLRLCRLMQAVARRSSYLALLEEQPAARRRLVRLFADSAFL 567

Query: 609 AVQLAKFPMLLDELIDPAHLYDTTSLDDYPSELRQYLLRVPEDDMEQQMEALRQFKLSQQ 668
           A ++   P+LLD+++DP          D  +E+ + L  + E + E ++E + +FK S  
Sbjct: 568 AERVIAQPLLLDDVLDPRIDQLPLKRADITAEIARVLGTLEEREAEAELERINEFKASTA 627

Query: 669 LKIAAADVTGVLPVMQVSDHLTFLAEAIIEQVVMQAWQQVAVRHGVPSYLAESSDTGFAV 728
            ++  A   G    +  +  L  LAE+++  V+  A +++  +HG          +GF+V
Sbjct: 628 FRLGLAFNDGRADAVATARRLAALAESVVGAVLALAERELVAQHG----RLPGEGSGFSV 683

Query: 729 IGYGKLGGIELGYGSDLDLVFLYEAPENMANSLTNGDRPIEVGHFYLKLAQRILHLFSTR 788
           +GYG LGG ELG+ SDLDLVF+Y+     A++L++G RPIE   +Y +LAQR+++  +  
Sbjct: 684 LGYGSLGGEELGFASDLDLVFIYDG--RRAHALSDGARPIEGSRWYQRLAQRVMNWLTVL 741

Query: 789 TTSGELYEVDMRLRPSGASGLMVSEIARFGEYQAQEAWTWEHQALVRSRFVFGDNSLAVK 848
           T  G LYEVD RLRP G+ GL+VS +  F  YQ   AWTWEHQAL+R+R V GD +L  +
Sbjct: 742 TRGGRLYEVDTRLRPDGSKGLLVSSLDAFMAYQQSRAWTWEHQALLRARPVAGDGTLNAE 801

Query: 849 FSQIRACVLEQSRDKDELKKAVREMRQKMRDHLLKVSEGEFDLKQSPGGITDIEFIAQYL 908
            + +R  +L   R++  +   V  MR + R    +  E   DLKQ  GG+ DIEF  Q L
Sbjct: 802 LAAVRRAILAVPRERATVLAEVASMRARWRAERDRSDERRLDLKQGHGGLLDIEFALQGL 861

Query: 909 VLANAHEYPEL 919
           VLA+A   P L
Sbjct: 862 VLAHAAAQPAL 872



 Score =  110 bits (275), Expect = 5e-28
 Identities = 92/346 (26%), Positives = 163/346 (47%), Gaps = 19/346 (5%)

Query: 621 ELIDPAHLYDTTSLDDYPSELRQYLLRVPEDDMEQQMEALRQFKLSQQLKIAAADVTGVL 680
           +L+ PA L    S  D  +  R   L++P D+    M  LR+F+ ++ L++   DV  + 
Sbjct: 60  QLLAPAGLERLRSGSD--ASARSDALKLPADEAAC-MTVLRRFRHAEALRLVFRDVNALD 116

Query: 681 PVMQVSDHLTFLAEAIIEQVVMQAWQQVAVRHGVPSYLAESSDTGFAVIGYGKLGGIELG 740
            + +     + L E ++E  +  + + +A R+G  S   + +     VIG+GKLGG EL 
Sbjct: 117 ELPETLSATSVLYEVLLELALGWSERALAARYGA-SRDHDGALQRLLVIGFGKLGGSELN 175

Query: 741 YGSDLDLVFLYEAPENMANSLTNGDRPIEVGHFYLKLAQRILHLFSTRTTSGELYEVDMR 800
           + SD+DLVF Y    +     ++G R ++   ++++L ++++ L +  T  G    VD+R
Sbjct: 176 FSSDIDLVFAYPQGGH-----SDGARALDNSEYFVRLGRQLVRLLNEPTMDGICARVDLR 230

Query: 801 LRPSGASGLMVSEIARFGEYQAQEAWTWEHQALVRSRFVFGDNSLAVKFSQI-RACVLEQ 859
           LRP G +G +        +Y   E   WE  A +++R V GD +   +  ++ R  V  +
Sbjct: 231 LRPFGNAGRLALSFVAMEQYYQNEGRDWERYAWIKARPVAGDRAAGKQLQELLRPFVYRK 290

Query: 860 SRDKDELKKAVREMRQKMRDHLLKVSEGEFDLKQSPGGITDIEFIAQYLVLANAHEYPEL 919
             D       +REM+  +   + +    + +LK   GGI +IEFI Q   L      P L
Sbjct: 291 YLDYTAFA-GLREMKALIDAEVARKDLAD-NLKLGAGGIREIEFIVQLTQLIRGGREPSL 348

Query: 920 SIWSDNVRIFGVLAELEL---LPLMSAQHLTQSYCWLRDENHRLTL 962
            +      + G L   E    +    A+ L ++Y  LR   +R+ +
Sbjct: 349 RVRG----LLGALTACEARGHIGAARARMLREAYVLLRRVENRVQM 390