Pairwise Alignments

Query, 990 a.a., glutamate-ammonia-ligase adenylyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 930 a.a., glutamine-synthetase adenylyltransferase from Burkholderia phytofirmans PsJN

 Score =  476 bits (1224), Expect = e-138
 Identities = 334/949 (35%), Positives = 486/949 (51%), Gaps = 80/949 (8%)

Query: 88  SDYIANQLTRSPEWINALFADDLQQVERKLFDAQ---LREQLASAT----TEDMAKRLLR 140
           S Y A      P+ +  + A     + R+  DA+   L  + A AT     ED  KR LR
Sbjct: 12  SHYAARAAAARPQLVARVAALASGPLTRERIDARFDALCAEAAGATDAPLNEDALKRALR 71

Query: 141 RFRNYQMVRFAWRDFLDYASLEESLLDLSALAEALVIGARDWLYKEMCVQYGTPMDKAGN 200
           + R         RD    A + E    ++ LAE  +  A   L  E+   YG P    G 
Sbjct: 72  QLRTEVFCAVMERDLAGEADVAEVTGAMTDLAETTIQRALAVLSAELETLYGEPRGPQGE 131

Query: 201 PQPLLILGMGKLGGRELNFSSDIDLIFTFPEHGETVGGRRS-LDNQQFFIRMGQRLVNLL 259
              L ++GMGKLGGRELN SSDIDLIF + E GET GG+RS +  Q+FF R+G+RL+  L
Sbjct: 132 RLSLGVVGMGKLGGRELNVSSDIDLIFIYEEDGETSGGQRSPIATQEFFTRLGKRLIGAL 191

Query: 260 DQITVDGFVFRVDMRLRPYGESGPLVVSFSGLEDYYQEQGRDWERYAMVKARSLGPW--- 316
            ++T DG+VFRVDMRLRP G+SGPLV S   LE+Y+  QGR+WERYA +K R +      
Sbjct: 192 AEVTGDGYVFRVDMRLRPNGDSGPLVCSLGMLEEYFYVQGREWERYAWIKGRLVSEGASD 251

Query: 317 --NHFSDELHSLLRPFVYRRYIDFSAIESLRKMKQLIAQEVRRR-----QLTDNIKLGAG 369
                  +L +++ PFVYRRY+DF  I ++R +   I QE +RR        D+IKLG G
Sbjct: 252 AAQRLQKQLDAIVTPFVYRRYLDFGVISAIRALHLQIRQEAQRRASMRPDKADDIKLGRG 311

Query: 370 GIREVEFVVQSFQLIRGGREPSLRQQSLFGAMDTLYSLGQFEYLAVDELKHSYLLLRRVE 429
           GIRE+EF  Q FQLIRGG++   R +     +    + G  +     +L  +Y  LR +E
Sbjct: 312 GIREIEFSAQVFQLIRGGQDAGFRVRPTLAVLRHAATHGLLDTSVCVKLSQAYRFLRELE 371

Query: 430 NLLQAIDDKQTQTLPNNALDWARLCYVLDMTNEIDLRTHIEAAMAKIHRHFKA----TVG 485
           + LQ  +D QT  +P +  D + L + +   +   L T ++A    + + F       V 
Sbjct: 372 HRLQYRNDAQTHAMPVDPEDRSALAHAMGCDDYAALMTKLDAHREFVEQQFDQIFADKVN 431

Query: 486 GEEG----EEKAEHWTAQLW-NVQQDDHAINLLAEQQIDDDKLWP--LLSRWR---ETVT 535
           G +G    E+ A  W   +W +   DD A   L  + ++     P  L++R R   ++  
Sbjct: 432 GRDGCGAPEDGAAAW---VWSSALADDSADEALQSRLVELGVAEPGELVARLRAIWQSSR 488

Query: 536 KRSIGPRGRETLDKLMPRLLDELLNQPSPSAAFEPVSK---VLEQILTRTTYLELLCENP 592
              +  R R+  D +  R L+            + V++   +LE +  R  YL LL E P
Sbjct: 489 YAGLAERSRQRFDIVAQRALEAARTLEPAERRGDTVARFFDLLEAVSRRGAYLALLTEYP 548

Query: 593 GARQQLVSLCCASPWIAVQLAKFPMLLDELIDPAHLYDTTSLDDYPSELRQYLLRV-PED 651
            A  +++S+   S W A  L + P LLDEL+D   +    S  D+P   R   LR+   D
Sbjct: 549 QALHRVLSVLGGSRWAAGYLIRHPQLLDELLDDEAI---NSPFDWPEFKRTLRLRLAAAD 605

Query: 652 DMEQQMEALRQFKLSQQLKIAAADVTGVLPVMQVSDHLTFLAEAIIEQVVMQAWQQVAVR 711
            +EQQM+ LR    ++  +I   D+ G L V  VSD L+ LA+A+++  +   W Q+  R
Sbjct: 606 GVEQQMDLLRHAHQAEVFRILLIDLAGKLSVEHVSDRLSELADAVLDVTLQAVWNQLPKR 665

Query: 712 H-GVPSYLAESSDTGFAVIGYGKLGGIELGYGSDLDLVFLYEAPENMANSLTNGDRPIEV 770
           H  VP          FAVI YGKLGG ELGY SDLDL+FLY+ P++ A  +         
Sbjct: 666 HRDVPR---------FAVIAYGKLGGKELGYASDLDLIFLYDDPDDAAADV--------- 707

Query: 771 GHFYLKLAQRILHLFSTRTTSGELYEVDMRLRPSGASGLMVSEIARFGEYQAQE------ 824
              Y    +R++   +T T +G L++VD+RLRP+G SGL+V+++  F  YQ +E      
Sbjct: 708 ---YATYTRRLITWLTTATGAGTLFDVDLRLRPNGESGLLVTDLDAFRRYQLREGDAANT 764

Query: 825 AWTWEHQALVRSRFVFGDNSLAVKFSQIRACVLEQSRDKDELKKAVREMRQKMR----DH 880
           AW WEHQAL R+R+  GD  +  KF  IR  VL   R+   L K + EMR ++     +H
Sbjct: 765 AWVWEHQALSRARYCAGDAEIGAKFEAIREQVLTTPREAAPLMKEIVEMRARVEAGHPNH 824

Query: 881 LLKVSEGEFDLKQSPGGITDIEFIAQYLVLANAHEYPELSIWSDNVRIFGVLAELELLPL 940
                   FDLK   GG+ DIEF  QY VL +A   PEL   + N+ +   ++   L+  
Sbjct: 825 -----TALFDLKHDSGGMVDIEFTVQYWVLLHAASDPELIRNTGNIALLREVSRFGLMSE 879

Query: 941 MSAQHLTQSYCWLRDENHRLTLQ-QKSGKLAYADVAAHAERILAIYQAI 988
             A+ +  +Y   R   H+L L   +  ++  A VA   E +LA+++ +
Sbjct: 880 AEAETVGAAYRTYRKLQHQLRLDGMEKARVEPALVAKEREAVLALWKRV 928



 Score = 92.4 bits (228), Expect = 1e-22
 Identities = 93/358 (25%), Positives = 151/358 (42%), Gaps = 47/358 (13%)

Query: 70  LANLTAAQQ--QELKTVLGLSDYIANQLTRSPEWINALFADDL--QQVERKLFDAQLREQ 125
           LA LT   Q    + +VLG S + A  L R P+ ++ L  D+      +   F   LR +
Sbjct: 541 LALLTEYPQALHRVLSVLGGSRWAAGYLIRHPQLLDELLDDEAINSPFDWPEFKRTLRLR 600

Query: 126 LASATTEDMAKRLLRRFRNYQMVRFAWRDFLDYASLEESLLDLSALAEALVIGARDWLYK 185
           LA+A   +    LLR     ++ R    D     S+E     LS LA+A++      ++ 
Sbjct: 601 LAAADGVEQQMDLLRHAHQAEVFRILLIDLAGKLSVEHVSDRLSELADAVLDVTLQAVWN 660

Query: 186 EMCVQYGTPMDKAGNPQPLLILGMGKLGGRELNFSSDIDLIFTFPEHGETVGGRRSLDNQ 245
           ++      P      P+   ++  GKLGG+EL ++SD+DLIF + +  +           
Sbjct: 661 QL------PKRHRDVPR-FAVIAYGKLGGKELGYASDLDLIFLYDDPDDAAA-------- 705

Query: 246 QFFIRMGQRLVNLLDQITVDGFVFRVDMRLRPYGESGPLVVSFSGLEDYYQEQGRD---- 301
             +    +RL+  L   T  G +F VD+RLRP GESG LV        Y   +G      
Sbjct: 706 DVYATYTRRLITWLTTATGAGTLFDVDLRLRPNGESGLLVTDLDAFRRYQLREGDAANTA 765

Query: 302 --WERYAMVKARSLGPWNHFSDELHSLLRPFVYRRYIDFSAIESLRKMKQLIAQEVR--- 356
             WE  A+ +AR          +  ++      R  +  +  E+   MK+++    R   
Sbjct: 766 WVWEHQALSRARYCAGDAEIGAKFEAI------REQVLTTPREAAPLMKEIVEMRARVEA 819

Query: 357 ---RRQLTDNIKLGAGGIREVEFVVQSFQLIRGGREPS----------LRQQSLFGAM 401
                    ++K  +GG+ ++EF VQ + L+    +P           LR+ S FG M
Sbjct: 820 GHPNHTALFDLKHDSGGMVDIEFTVQYWVLLHAASDPELIRNTGNIALLREVSRFGLM 877