Pairwise Alignments

Query, 324 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 607 a.a., diguanylate cyclase/phosphodiesterase from Pseudomonas syringae pv. syringae B728a

 Score =  121 bits (303), Expect = 5e-32
 Identities = 67/186 (36%), Positives = 108/186 (58%), Gaps = 2/186 (1%)

Query: 5   PIPDNELQRLSTLKALNILDTNAEERFDRITRLTRRIFALPICVVTLVDASRQWFKSCQG 64
           PIP NE QRL  ++ L +L+  +++ FD +  +T   F  PI ++++VD  RQ+F++  G
Sbjct: 6   PIPLNETQRLLRIRELCVLEDTSDDVFDELVAMTAAFFEAPIALISIVDEHRQFFRARVG 65

Query: 65  LEVTETSRDISFCGHAINHDGIFIVNDAQMDPRFHDNPLVTQSPHIRFYAGYPLTIRGEY 124
           L+  ET R++SFC + I  D +F + DA +D RF +N LVT  P IR+YAG PL      
Sbjct: 66  LKARETPRNVSFCAYTILSDTLFEIPDATLDARFVNNGLVTGHPDIRYYAGAPLITDDGI 125

Query: 125 RVGTLCLIGNEPRE-FSADDIETLTDLGQMVEAELLSISLNT-LDPLTMISNRRGFEQLA 182
            +G+LC+I  +PRE  S    + L     +V   ++ + L+  +D  T + NR   ++  
Sbjct: 126 ALGSLCVIDTKPREPMSEYQTQMLKRFASLVMKRIVGLRLSCFIDQPTGLYNRSRLQEDI 185

Query: 183 FQSLAS 188
            Q++AS
Sbjct: 186 HQAVAS 191