Pairwise Alignments

Query, 324 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 169 a.a., GAF domain-containing protein from Synechocystis sp000284455 PCC 6803

 Score =  167 bits (422), Expect = 2e-46
 Identities = 81/158 (51%), Positives = 108/158 (68%)

Query: 1   MQLPPIPDNELQRLSTLKALNILDTNAEERFDRITRLTRRIFALPICVVTLVDASRQWFK 60
           MQ   IP NE QRL+ L+ L ILDT ++E+F+RITRL  R+  +P+  ++LVD +RQWFK
Sbjct: 1   MQQAAIPANEQQRLAHLQNLKILDTPSDEKFNRITRLLCRVLDMPVAAISLVDENRQWFK 60

Query: 61  SCQGLEVTETSRDISFCGHAINHDGIFIVNDAQMDPRFHDNPLVTQSPHIRFYAGYPLTI 120
           S +GL++TET R +SFC H I  D   +++D   D RF DNPLV ++PH+RFYAG+PL I
Sbjct: 61  SIRGLDLTETPRCVSFCAHTILEDRTLVISDTLSDLRFADNPLVLEAPHVRFYAGHPLKI 120

Query: 121 RGEYRVGTLCLIGNEPREFSADDIETLTDLGQMVEAEL 158
                VGTLC+   +PRE S DD++ L DL   V  EL
Sbjct: 121 LDNIHVGTLCVYDTKPREISDDDVQFLEDLAITVANEL 158