Pairwise Alignments

Query, 324 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 327 a.a., diguanylate cyclase, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  326 bits (835), Expect = 5e-94
 Identities = 170/321 (52%), Positives = 216/321 (67%), Gaps = 1/321 (0%)

Query: 5   PIPDNELQRLSTLKALNILDTNAEERFDRITRLTRRIFALPICVVTLVDASRQWFKSCQG 64
           PIP +E +RL  L++LN+LDT AEERFDR+TRL RR+F +PIC+++LVD+ RQWFKSC G
Sbjct: 5   PIPFDEAERLEALRSLNVLDTEAEERFDRLTRLARRLFDVPICLISLVDSDRQWFKSCIG 64

Query: 65  LEVTETSRDISFCGHAINHDGIFIVNDAQMDPRFHDNPLVTQSPHIRFYAGYPLTIRGEY 124
           L  +ET RDISFCGHAI    IF++ DA  D RF DNPLVT  PHIRFYAGYPLT+   +
Sbjct: 65  LSQSETRRDISFCGHAIMQADIFVIEDALEDLRFADNPLVTGEPHIRFYAGYPLTLSNGH 124

Query: 125 RVGTLCLIGNEPREFSADDIETLTDLGQMVEAELLSISLNTLDPLTMISNRRGFEQLAFQ 184
           RVGTLC+I  + R F  +D   L DLG++V +EL ++   TLDPLT +SN RGF+ LA Q
Sbjct: 125 RVGTLCIIDRKARRFEPEDYCDLEDLGKLVVSELEAVQTATLDPLTGLSNLRGFDLLAKQ 184

Query: 185 SLASCRRTNSQAALVFFDLDFFKELNDSFGHRKGDQVLYDFAHLLMAAFRESDVIARLGG 244
            LA C+R    A L F DLD+FKE+ND FGH++G+  L  FA LL  AFRE DVIAR+GG
Sbjct: 185 CLAKCQRQQQDATLFFLDLDYFKEINDRFGHQEGNSALVAFASLLKEAFREYDVIARIGG 244

Query: 245 DEFVVLLSFVK-IDAVHVAIERFQSLLEQYNQQHPQQPTLVSSIGVAHWSPELDINLEDL 303
           DEFV L+S  + +      + R +  L ++N   P    L  S G A +   L  +LE L
Sbjct: 245 DEFVALVSHERSMSPAAGILSRLRHNLARHNIDTPIGYQLEFSCGTARFDALLPSSLERL 304

Query: 304 LDAADRAMYQDKAEHHLNKPE 324
           L+ AD  MY++K  HH    E
Sbjct: 305 LEDADIHMYREKQIHHQKHDE 325