Pairwise Alignments

Query, 324 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 498 a.a., diguanylate cyclase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  102 bits (254), Expect = 2e-26
 Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 1/151 (0%)

Query: 167 DPLTMISNRRGFEQLAFQSLASCRRTNSQAALVFFDLDFFKELNDSFGHRKGDQVLYDFA 226
           D LT + NRR  ++         RR      L+  DLD FK +ND++GH  GD VL + A
Sbjct: 329 DALTRLHNRRSLDERLRTEFERHRRYGHSMTLLLLDLDHFKAINDTYGHLAGDAVLRELA 388

Query: 227 HLLMAAFRESDVIARLGGDEFVVLLSFVKIDAVHVAIERFQSLLEQYN-QQHPQQPTLVS 285
            +L  + R +D  AR GG+EFVV+L   +    H+  ER +  +EQ   Q H  Q +   
Sbjct: 389 DVLRHSIRTTDFAARYGGEEFVVILPHTEEAQGHMLAERLRHRIEQCRVQHHGVQLSATV 448

Query: 286 SIGVAHWSPELDINLEDLLDAADRAMYQDKA 316
           SIGVA +SP    N+E+L+  ADRA+Y  KA
Sbjct: 449 SIGVAGFSPGAFANVEELVREADRALYLAKA 479