Pairwise Alignments

Query, 324 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 348 a.a., sensor domain-containing diguanylate cyclase from Ralstonia sp. UNC404CL21Col

 Score =  223 bits (569), Expect = 4e-63
 Identities = 136/336 (40%), Positives = 187/336 (55%), Gaps = 23/336 (6%)

Query: 1   MQLPPIPDNELQRLSTLKALNILDTNAEERFDRITRLTRRIFALPICVVTLVDASRQWFK 60
           M+  PIP NE +RL++L+ + +L T  EE FDR+TR T+R+F  PI +V+L+DA RQWFK
Sbjct: 1   MKPAPIPTNEPERLASLQDMLLLSTPDEELFDRVTRTTKRVFDAPIVLVSLIDAQRQWFK 60

Query: 61  SCQGLEVTETSRDISFCGHAINHDGIFIVNDAQMDPRFHDNPLVTQSPHIRFYAGYPLTI 120
           SC GL V ET RDISFCGHA+  + + ++ D + DPRF DNPLVT +PHIRFYAG P+  
Sbjct: 61  SCIGLNVRETGRDISFCGHAVAEEQMLVIPDTKADPRFADNPLVTGAPHIRFYAGRPVKN 120

Query: 121 RGEYRVGTLCLIGNEPREFSADDIETLTDLGQMVEAEL----LSISLNTL---------- 166
              Y VGTLC+I  +PR F   + E L DL   VE+      LS S  ++          
Sbjct: 121 LAGYAVGTLCVIDQKPRPFEQAERELLNDLASWVESGFRERELSESQRSILTELQVARHE 180

Query: 167 ---DPLTMISNRRGFEQLAFQSLASCRRTNSQAALVFFDLDFFKELNDSFGHRKGDQVLY 223
              DP+  I NRR   +L  +            +L+  D+D FK +ND++GH  GD VL 
Sbjct: 181 SLTDPMLGIWNRRAAMELLTRECGHAMLHGQPLSLLVVDVDHFKRVNDTYGHPAGDAVLV 240

Query: 224 DFAHLLMAAFRESDVIARLGGDEFVVLL-SFVKIDAVHVAIERFQSLLEQYNQQHPQQPT 282
           + A  L    R  D + R GG+EF+V+L     + A  +A +R +S +E      P +  
Sbjct: 241 EIARTLRVNSRPVDAVGRYGGEEFLVVLPDTTTLQATGIA-QRLRSAVESLEIATP-EAN 298

Query: 283 LVSSIGVAHWSPELDINL---EDLLDAADRAMYQDK 315
           +  +I V   S E   NL    DL+  AD A+   K
Sbjct: 299 IRCTISVGLASCEAGRNLCTPTDLIMRADAALLAAK 334