Pairwise Alignments

Query, 324 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 330 a.a., diguanylate cyclase from Burkholderia phytofirmans PsJN

 Score =  111 bits (277), Expect = 3e-29
 Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 6/297 (2%)

Query: 24  DTNAEERFDRITRLTRRIFALPICVVTLVDASRQWFKSCQGLEVTETSRDISFCGHAINH 83
           D    E F     + + +    I  +TL+D   Q +++  G+ +   +R  S   +A+  
Sbjct: 25  DQVMRECFTHAAEILKSVTGAAITAITLLDEEYQHYRAEVGMAMPLVTRARSLADYAVRD 84

Query: 84  DGIFIVNDAQMDPRFHDNPLVTQSPHIRFYAGYPLTIRGEYRVGTLCLIGNEPREFSADD 143
             +F++ DA  D RF +  LV + P +RFYA   L       VG LC +   P    A  
Sbjct: 85  AELFVIEDAHDDTRFGECMLVQRHPFVRFYAAIALRAPNGEIVGALCAMDPAPGRLDAGQ 144

Query: 144 IETLTDLGQMVEAELLSISLNTLDPLTMISNRRGFEQLAFQSLASCRRTNSQAALVFFDL 203
                 L  M+E +L   +   +DPLT + NRR   +   +     R  +   ++V  D+
Sbjct: 145 RGVFYHLRAMIENDLKMRTATAIDPLTQLYNRRFLLESIARRWKEARDGDVMGSVV-VDV 203

Query: 204 DFFKELNDSFGHRKGDQVLYDFAHLLMAAF-RESDVIARLGGDEFVVLLSFVKIDAVHVA 262
           D+FK+ ND++GH+ GDQ L   A ++ AA   E  ++ R+GG+EF +L+   +  A+   
Sbjct: 204 DWFKQYNDTYGHQAGDQCLRKVASVMQAAADGERIIVGRMGGEEFGLLVLHAEYAALEDT 263

Query: 263 IERFQSLLEQYNQQHPQQP----TLVSSIGVAHWSPELDINLEDLLDAADRAMYQDK 315
           ++  +  +     +H   P    T+     +   S        +   +ADRA+Y+ K
Sbjct: 264 LDTLRQGVADLAIEHRASPLGRVTVSVGASLTRISETSRPAHREGFASADRALYRSK 320