Pairwise Alignments

Query, 216 a.a., conserved domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 469 a.a., Predicted Zn-dependent peptidases from Sphingomonas koreensis DSMZ 15582

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 3/177 (1%)

Query: 32  NQLTPQDITLSCRSLAALLGRSFSGRLYYDLREKRGLTYGIYGQCTNAPLSSSIKFYGST 91
           N  TP DI +  R   ALLG SFS R+  ++RE +G TY         P ++   F    
Sbjct: 286 NAGTPGDIPM--RVSNALLGGSFSSRITRNIREAKGYTYSPGSGLAFYPANAVWTFNADV 343

Query: 92  AIEHSGAFVVGILDHLKWLTSAPVSEGELNTLKTYLIGEVLLTKDHPSQSEAQFIHQQVL 151
               +G  +  +   ++ L + P  + E   ++ Y+ G  ++    P         +  L
Sbjct: 344 TTAVTGPALKEVFHEIRTLQATPPGDEEAAGMRQYMAGLFVIQNSTPGALVGSLATRDSL 403

Query: 152 GLDPQSMQAINAKLQALSPSQLMLLAQQAFHGEPLIILRGDVNKISADLTAKLPEWK 208
           GL    M        A++P+Q+   A+     +  +++ GD+  ++  L  +LPE K
Sbjct: 404 GLPRDWMDKYVPATLAVTPAQISEAAKNLPIDKLTLVVVGDLKVVTPQL-QELPELK 459