Pairwise Alignments

Query, 216 a.a., conserved domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 944 a.a., Predicted Zn-dependent peptidases from Sphingomonas koreensis DSMZ 15582

 Score = 41.2 bits (95), Expect = 7e-08
 Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 5/170 (2%)

Query: 48  ALLGRSFSGRLYYDLREKRGLTYGIYGQCTNAPLSSSIKFYGSTAIEHSGAFVVGIL-DH 106
           A LG  F+ RL  ++R KRGL YG  G   +A  +  I    +     S   VV ++   
Sbjct: 768 ATLGVGFTSRLNREIRIKRGLAYGA-GSSVDARRAPGIVTASTQTKNPSAPEVVSLIAAE 826

Query: 107 LKWLTSAPVSEGELNTLKTYLIGEVLLTKDHPSQSEAQFIHQQVLGLDPQSMQAINAKLQ 166
           +K L   PV   EL++ K  L+G      +               G+   ++      +Q
Sbjct: 827 MKKLGETPVPAAELDSRKAVLVGSFGRRIERTDGIAGALADYVAEGVPLDTLSTYIPSIQ 886

Query: 167 ALSPSQLMLLAQQAFH-GEPLIILRGDVNKISADLTAKLPEWKLEVVKVT 215
            + P+++   A++        II+ GD      +L    P   LEV+  T
Sbjct: 887 GVDPARVQAAAKKVLDPARASIIVVGDAKLFVDELRKAHP--NLEVIPAT 934