Pairwise Alignments

Query, 347 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 495 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 71/306 (23%), Positives = 122/306 (39%), Gaps = 39/306 (12%)

Query: 31  ILGACQQTQLSFTPTQAPTLANFDT-----QPNLPQVENIYLPNEQPFIDVTPDGIAIPY 85
           +L  CQ   L + P   P LA+F T      P      +  + NE      T     IP+
Sbjct: 16  LLAGCQHKALEYEPIAPPVLADFSTPALLAMPLASNASDNRVTNENATATGTVPHQGIPF 75

Query: 86  QLQRTASTTQNLSNRVSLVAISPNLPFDNPDILQ-----------------VAFQEKAR- 127
            +   A      +  +++      L F + + L+                 +A Q +A+ 
Sbjct: 76  PVLHPAVNPPRPATGMAMADDKGMLSFHHDERLEATHLVITTAGVITSGPLIARQMQAQL 135

Query: 128 SLALTQADACLETFETRVTLHSINLSLTCPASVNHLYQLLVQFWQHEAFSKPTAVDIDNI 187
            L     + C ET       HS+  S  C   +  L ++     ++ A  K  +   D +
Sbjct: 136 RLDALAGERCAETLSVIARPHSVVFSSRCDGPMALLMRVRSLIERYGALDKDNS---DRV 192

Query: 188 RRQLKLNKHLNAFSGAEIDKAWRDKLLGTTHPYNKSVNNEALFDSLSLNELSRLQQRTFA 247
            R+ +L KH+ AFSG +ID+ W   +LG +HPY    N           +L+ + +   A
Sbjct: 193 IRESQLAKHIEAFSGRDIDRLWAQVVLGKSHPYLSLYNT----PESKRPDLADVVKALAA 248

Query: 248 QANWQLFLPNNAQAEFDLKQSLTLWPTYVNKDSPSPSALINTVLAQKPPQSRTLYVIDAP 307
           Q  W L     A+A   L  ++   P ++     SP  +  +V  ++    + LY++ AP
Sbjct: 249 QGRWHLI---GARAPESLTSAVK--PAFI----ASPYGIGESVSERRQNTGKVLYLLHAP 299

Query: 308 GSVQTR 313
           G VQ++
Sbjct: 300 GQVQSQ 305