Pairwise Alignments

Query, 574 a.a., sodium/hydrogen exchanger family/TrkA domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 610 a.a., sodium/hydrogen exchanger (NCBI) from Rhodospirillum rubrum S1H

 Score =  377 bits (969), Expect = e-109
 Identities = 217/561 (38%), Positives = 337/561 (60%), Gaps = 12/561 (2%)

Query: 1   MDADSINSFFLIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYST 60
           M+ D++    LIGA L  +SV+ S +S R+G P+LL+FL VG+LAG+DG GGI+F+D  T
Sbjct: 1   MEMDTMFLAILIGAGLIGISVVTSLISFRVGAPLLLVFLGVGLLAGQDGIGGIVFNDSGT 60

Query: 61  AYLVSNFALAIILLDGGMRTRVASFRVALWPALSLATFGVAITTSITGVMAAWLFDLHWL 120
           AY + + ALA+IL D G  TR+ +FR+A  P++ LAT GVA+TT++  + +  L  L W 
Sbjct: 61  AYFIGSLALAVILFDSGFSTRLQTFRLAAAPSIVLATLGVALTTALVAIPSHSLLGLSWE 120

Query: 121 QGLLVGAIVGSTDAAAVFSLLK--GRSLNERVGATLEIESGSNDPMAVFLTVTLIAILAN 178
           +  L+GA+VGSTDAAAVF LL+  G  + +RV ATLE+ES +NDPMA+FLT+TL+ + + 
Sbjct: 121 ESALMGAVVGSTDAAAVFFLLRVGGILIRDRVRATLEVESSTNDPMAIFLTITLVELASA 180

Query: 179 VG--AELSASFMLISFIKQFGLGVLLGLGGGWLLWKLVNVSKLAEGLYSILVLSGGLMIY 236
            G   E  +  + ++F++Q GLG+L G  GG LL   +N  +L   LY IL L+  L ++
Sbjct: 181 GGFSGEALSWGLGLAFVRQMGLGLLCGWIGGHLLVVGINRLRLEPALYPILGLALALFLF 240

Query: 237 ATSNKLGGSGILSIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDL 296
           A  + + GSG L+IY+ G+ +GN+  RG  A+    + +TW++Q+ MFL LGL  +PS  
Sbjct: 241 AAVSMVDGSGFLAIYVAGMVMGNRKMRGGPALRRFQEALTWLAQMTMFLTLGLFASPSTF 300

Query: 297 LDIWLPGLALAFGMILFARPLAVWLSLLPFKSFGSRDRWFISWVGLRGAVPIILAVFPMM 356
           +D+ LP + +   ++  ARP+AVWL LLPF  +   +  F++WVGLRGAV I+LA+ P+ 
Sbjct: 301 IDVALPSVLIGLFLVFVARPVAVWLCLLPF-GYDRNETAFVAWVGLRGAVSILLAILPIA 359

Query: 357 AGLPGAQLYFNLAFFVVIVSLLVQGASLTTAARLAKVELPPKPLPISRSGVEIYPKSEWE 416
           AGL  AQ  FN AF VV+ SLL+QG ++   AR   + +PP+  P+ +  +++    + E
Sbjct: 360 AGLEHAQEMFNAAFIVVVTSLLLQGWTIRPMARWLGLVVPPRLGPVDKVELQLPYGGDHE 419

Query: 417 VFVYCLSE-SKWCIGEPLKRLAMPDGTRIAAVFRNNTLLHPSGSTCLEAGDILCVLGQEK 475
           + VY +++ S    GE + R A P     + V R+   +    S   + GD + +    +
Sbjct: 420 LLVYRIAKGSPVAEGERIPRWARP-----SLVVRDGRSMKVLDSGRPQPGDHVYIFSAPR 474

Query: 476 SLEALSNLFSQAPETDEVSR-FFGDFFIDTEVKLADLAPIYGLTLDDETGAMTVADLVAL 534
               L  LF++          +FGDF +D    + +LA +YG+ + +      V + +  
Sbjct: 475 HGALLDRLFARPTALSPADEAYFGDFSLDASRTMGELATLYGIKVPEGAQDTAVGEWLTQ 534

Query: 535 ELGAHPVLGDQFLWQSLHWVV 555
            LG  P  GD+ +   +  +V
Sbjct: 535 RLGGAPARGDRVVLPPIEIIV 555