Pairwise Alignments

Query, 574 a.a., sodium/hydrogen exchanger family/TrkA domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 574 a.a., sodium/hydrogen exchanger from Marinobacter adhaerens HP15

 Score =  492 bits (1267), Expect = e-143
 Identities = 262/564 (46%), Positives = 370/564 (65%), Gaps = 6/564 (1%)

Query: 11  LIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYSTAYLVSNFALA 70
           LIGAL+  +S++LSP+SSR+G+P+LLIFL VG++ GEDGPGGI FDD+  A+L++N AL 
Sbjct: 7   LIGALMLVISIVLSPLSSRVGMPVLLIFLVVGMMMGEDGPGGIQFDDFELAFLIANLALG 66

Query: 71  IILLDGGMRTRVASFRVALWPALSLATFGVAITTSITGVMAAWLFDLHWLQGLLVGAIVG 130
           +ILLDGGMRTR  +FRV L PAL LAT GVA+T +   V+A W+FDLHWL  LL+GAI+ 
Sbjct: 67  VILLDGGMRTRAETFRVGLKPALVLATLGVAMTAAGAAVVAWWVFDLHWLTALLIGAIIS 126

Query: 131 STDAAAVFSLLKGRS--LNERVGATLEIESGSNDPMAVFLTVTLIAILANVGAELSASFM 188
           STDAAAVFSLL+GR   LNERV ATLEIESGSNDPMA+FLT+ L+ ++ N G + +   +
Sbjct: 127 STDAAAVFSLLQGRGLHLNERVSATLEIESGSNDPMAIFLTLMLVTLIGNDG-DHAGWAV 185

Query: 189 LISFIKQFGLGVLLGLGGGWLLWKLVNVSKLAEGLYSILVLSGGLMIYATSNKLGGSGIL 248
           L   ++QFG+G + G+ GG+ + +L N  +L   LY +LV + G+ +++ +N LGGSG L
Sbjct: 186 LTMLVQQFGVGAVAGIIGGFAVVELANRIRLTPSLYPLLVAAAGISVFSATNALGGSGFL 245

Query: 249 SIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDLLDIWLPGLALAF 308
           +IYL G+ +GN+  R    IL V DG+ W++Q+ +FL+LGLL+TPSDL+ +   GL LA 
Sbjct: 246 AIYLTGVVIGNRHVRMMPMILQVHDGLAWLAQLCLFLMLGLLVTPSDLIPLAGGGLILAL 305

Query: 309 GMILFARPLAVWLSLLPFKSFGSRDRWFISWVGLRGAVPIILAVFPMMAGLPGAQLYFNL 368
            +I   RPL V L+L PF +F  R+  FISWVGLRGAVPI+LA+FP++A LP AQL F+ 
Sbjct: 306 SLIFIIRPLTVMLTLWPF-AFNRRELGFISWVGLRGAVPIVLALFPIIADLPEAQLVFHA 364

Query: 369 AFFVVIVSLLVQGASLTTAARLAKVELPPKPLPISRSGVEIYPKSEWEVFVYCLSESKWC 428
           AFF+V+VSLLVQG ++T  AR  ++E+P    P  R  ++     + E+ ++ L    W 
Sbjct: 365 AFFIVLVSLLVQGTTMTPLARKLRLEVPAGEDPYRRLPLDAPAAGDHELMLFPLRGEIWE 424

Query: 429 IGEPLKRLAMPDGTRIAAVFRNNTLLHPSGSTCLEAGDILCVLGQEKSLEALSNLFS--Q 486
               L +L +P+ T +A VFRN   L P     + +GD++ +      L  L    S   
Sbjct: 425 TPRRLSQLRLPENTAVAGVFRNRVCLQPKADLEVSSGDMVAMFATPSVLPELGKALSGRH 484

Query: 487 APETDEVSRFFGDFFIDTEVKLADLAPIYGLTLDDETGAMTVADLVALELGAHPVLGDQF 546
           AP+      FFGDF ++ +  L D+  +YG+  DD    +++A+  A     HPV+GD  
Sbjct: 485 APKYLAERAFFGDFVLNGDALLGDVEQVYGIEFDDLPPELSLAECFARRTKGHPVVGDVV 544

Query: 547 LWQSLHWVVAGLYEGKVTNVGIRL 570
               +  V       +VT VG+++
Sbjct: 545 TLGPVTLVARATSADQVTKVGLKM 568