Pairwise Alignments

Query, 574 a.a., sodium/hydrogen exchanger family/TrkA domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 490 a.a., putative Na+/H+ exchanger (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  298 bits (762), Expect = 4e-85
 Identities = 176/484 (36%), Positives = 280/484 (57%), Gaps = 18/484 (3%)

Query: 11  LIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYSTAYLVSNFALA 70
           LIG++L  VS+++     R G+P LL+FL VG+L G DG G + F D   A  +   AL+
Sbjct: 10  LIGSILLFVSIVVGKTGYRFGVPTLLLFLVVGMLFGSDGLG-LQFHDAKDAQFIGMVALS 68

Query: 71  IILLDGGMRTRVASFRVALWPALSLATFGVAITTSITGVMAAWLFDLHWLQ-------GL 123
           IIL  GGM T+    +  L P + L+T GV +T   TG+   WL  + W          L
Sbjct: 69  IILFSGGMDTKFREIKPILGPGIVLSTVGVLLTALFTGLFIWWLSGMSWTNIYLPITTSL 128

Query: 124 LVGAIVGSTDAAAVFSLLKGRSLN--ERVGATLEIESGSNDPMAVFLTVTLIAILANVGA 181
           L+ + + STD+A+VF++L+ + +N    +   LE+ESGSNDPMA  LT+ LI  + + G 
Sbjct: 129 LLASTMSSTDSASVFAILRSQKMNLKHNLRPMLELESGSNDPMAYMLTIVLIQFIQSAGM 188

Query: 182 ELSASFMLISFIKQFGLGVLLGLGGGWLLWKLVNVSKLA-EGLYSILVLSGGLMIYATSN 240
            + A  +  SFI QF +G   G   G L  +++N   +  + LY IL+L+     ++ ++
Sbjct: 189 GVGA--IAASFIIQFIVGAAAGYVLGKLAIRMLNKLNIDNQALYPILLLAFVFFTFSITD 246

Query: 241 KLGGSGILSIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDLLDIW 300
            L G+G L++Y+ G+ +GN     R  I   +DG+TW+ QI MFL LGLL+ P ++L++ 
Sbjct: 247 LLKGNGYLAVYIAGIMVGNNKIMHRKDIYTFMDGLTWLFQIIMFLCLGLLVNPHEMLEVA 306

Query: 301 LPGLALAFGMILFARPLAVWLSLLPFKSFGSRDRWFISWVGLRGAVPIILAVFPMMAGLP 360
              L +   MI+  RPL+V+L LLPF+    + R F+SWVGLRGAVPII A +P++AG+ 
Sbjct: 307 AVALLIGVFMIVIGRPLSVFLCLLPFRKITMKSRLFVSWVGLRGAVPIIFATYPVVAGVE 366

Query: 361 GAQLYFNLAFFVVIVSLLVQGASLTTAARLAKVELPPKPLPISRS--GVEIYPKSEWEVF 418
           G+ + FN+ FF+ IVSL+VQG +++  ARL  +    KPL  + +  GVE+  + + ++ 
Sbjct: 367 GSNIIFNVVFFITIVSLVVQGTTVSFVARLLHLS---KPLEKTGNDFGVELPEEIDTDLK 423

Query: 419 VYCLSESKWCIGEPLKRLAMPDGTRIAAVFRNNTLLHPSGSTCLEAGDILCVLGQEKSLE 478
              +++      + LK + +P GT +  V R +  L P+G+  L   D L ++ ++   +
Sbjct: 424 DMTITQEMLEEADTLKDMNLPKGTLVMIVKRGDEFLIPNGTLKLHVNDKLLLISEKPKED 483

Query: 479 ALSN 482
             +N
Sbjct: 484 EEAN 487