Pairwise Alignments

Query, 336 a.a., sugar-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., rhizopine binding protein from Sinorhizobium meliloti 1021

 Score = 53.5 bits (127), Expect = 7e-12
 Identities = 71/294 (24%), Positives = 118/294 (40%), Gaps = 25/294 (8%)

Query: 34  SVFFDQSKNGCIDAAAQIEGVECIYRGPEISSVRLQDQVINQLIDEGVDGIAVAVTQSKY 93
           S F    +NG  D AA+++GV       +  + R  DQV N  +  GVD I V       
Sbjct: 31  SAFLTILRNGMQDQAAKLDGVTVQVEDAQNDTSRQLDQVQN-FVSSGVDAIIVVAVDGD- 88

Query: 94  LVENSLKRAKEVGIPIVTYDSDFDASINGDPKNFRLAYIGTDNFELGKSLGEELKKLRPN 153
                 K A + GIPIV Y +   A ++  P+    A++G++  + G    +E+ +L   
Sbjct: 89  STPALTKMATDAGIPIV-YANHPPADVDKLPET--AAFVGSNEIDSGTLETKEVCRLLGG 145

Query: 154 GGMLIMQSGRPDSPNLNLRLMGVRSALSGKKYDIPPGKLLNNEQGWTEVREPLFNFDQLS 213
            G   +  G           +   S+L+  K DI      +  +G + + E   N+D+L 
Sbjct: 146 KGAAYVLMGP----------LNNHSSLTRTK-DIHDVIATDECKGMSVIEEQSANWDRLE 194

Query: 214 QAVKQMESVMKGKPVKADSFIAVGGWAQNNDALYRDMIAPFQEK-INDKEVVIVMTDTSP 272
            A      +  G+   A   IA      NND +    I   +   ++  +VV+   D +P
Sbjct: 195 AANIMTNWLSTGREFNA--IIA------NNDEMAIGAIQAMKAAGVDMSKVVVGGIDATP 246

Query: 273 EQLTMLKDNLAHINVGQNPYEMGRQAILTLYKIVTKQQYEEVIYTPVTFCTPQN 326
           + L  +      + V QN    G  A+     +   Q+    I+ P    TP+N
Sbjct: 247 DGLAAMAAGDLDVTVFQNAIAQGAAAMDAAVALSRDQKTARQIWVPFELVTPEN 300