Pairwise Alignments

Query, 336 a.a., sugar-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 333 a.a., autoinducer 2 ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 23/226 (10%)

Query: 3   RLLMLIIALGLLPISSVYGKELKLALVPKFYSV-FFDQSKNGCIDAAAQIEGVECIYRGP 61
           +L++L +ALG+    +      ++A +PK   V FF    NG  +A   + GV+  Y GP
Sbjct: 4   KLMVLAMALGMASAQAAD----RIAFIPKLVGVGFFTSGGNGAKEAGKAL-GVDVTYDGP 58

Query: 62  EISSVRLQDQVINQLIDEGVDGIAVAVTQSKYLVENSLKRAKEVGIPIVTYDSDFDASIN 121
              SV  Q Q+IN  +++G + I V+      L   +LKRA + G+ ++T+DSD      
Sbjct: 59  TEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCP-ALKRAMQRGVKVLTWDSD------ 111

Query: 122 GDPKNFRLAYI--GTDNFELGKSLGEELKK--LRPNGGMLIMQSGRPDSPNLNLRLMGVR 177
                 R  YI  GT   +LG  L E  +K   +P   +    S    SP +  +   V+
Sbjct: 112 -TKPECRSIYINQGTPQ-QLGGLLVEMAEKQVTKPTAKVAFFYS----SPTVTDQNQWVK 165

Query: 178 SALSGKKYDIPPGKLLNNEQGWTEVREPLFNFDQLSQAVKQMESVM 223
            A +  + + P  +++  + G+ +  + L   + + +A   +++++
Sbjct: 166 EAKAKIEKEHPQWEVVTTQFGYNDATKSLQTAEGILKAYPDLDAII 211