Pairwise Alignments

Query, 336 a.a., sugar-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 328 a.a., rhamnose ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score = 73.2 bits (178), Expect = 9e-18
 Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 10/178 (5%)

Query: 7   LIIALGLLPISSVYGKELKLALVPKFY-SVFFDQSKNGCIDAAAQIEGVECIYRGPEISS 65
           LI+ + +L +S     E+K+ALV K   + FF+ +  G  +AA ++  V+ IY GP  ++
Sbjct: 7   LILTVAILALSGSALAEVKIALVAKSLGNGFFEAANVGAQEAAKELGDVKVIYTGPTTTT 66

Query: 66  VRLQDQVINQLIDEGVDGIAVAVTQSKYLVENSLKRAKEVGIPIVTYDSDF---DASING 122
              Q +V+N LI +GVD IA++      +V   LK+A + GI +V++DS        I+ 
Sbjct: 67  AEAQIEVLNGLIAQGVDAIAISANDPDAVVP-VLKKAMQRGIKVVSWDSGVAPAGRQIHL 125

Query: 123 DPKNFRLAYIGTDNFELGKSLGEELKKLRPNGGMLIMQSGRPDSPNLNLRLMGVRSAL 180
           +P N   A IG  N +L     + LK L    G + + S  P S N N+ +  ++  L
Sbjct: 126 NPSN--NALIGETNVKLA---ADALKALNVEKGDVAILSATPTSTNQNIWIEEMKKVL 178