Pairwise Alignments

Query, 336 a.a., sugar-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 315 a.a., monosaccharide ABC transporter substrate-binding protein, CUT2 family from Paraburkholderia bryophila 376MFSha3.1

 Score = 63.2 bits (152), Expect = 9e-15
 Identities = 72/338 (21%), Positives = 144/338 (42%), Gaps = 32/338 (9%)

Query: 1   MARLLMLIIALGLLPISSVYGKEL--KLALVPKFY-SVFFDQSKNGCIDAAAQIEGVECI 57
           M ++ +L  A  +  + S Y +    ++A++ K   S ++   + G   A A  +G    
Sbjct: 1   MKKVSVLAAAAAMCAMFSAYAQAAGGEIAVIVKTANSNYWQNVQKGATAAMADAKGYTMT 60

Query: 58  YRGPEISSVRLQDQV--INQLIDEGVDGIAVAVTQSKYLVENSLKRAKEVGIPIVTYDSD 115
           ++GP   S  + D+V  +   ++  V GI +A +    LV  ++K+A E  IP+V  DS 
Sbjct: 61  FQGPAAESA-IADEVNMVENAVNRHVAGIVLAPSDPDALVP-AMKKAWEAHIPVVLIDS- 117

Query: 116 FDASINGDPKNFRLAYIGTDNFELGKSLGEELKKLRPNGGMLIMQSGRPDSPNLNLRLMG 175
              +++   K +  +++ TDN + G+   + +       G + + S  P + +   R+ G
Sbjct: 118 ---TVSDAGKQYYQSFLSTDNVKAGELCAKAMIDRVGQTGKVAVMSYVPGAGSEVGRVGG 174

Query: 176 VRSALSGKKYDIPPGKLLNNEQGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIA 235
            R      KY     KL        ++  P ++  Q++ A+ Q   V+   P     F A
Sbjct: 175 FR------KYIAAHSKL--------QLVGPFYSQSQMANALNQTTDVLSANPDLKGIFGA 220

Query: 236 VGGWAQNNDALYRDMIAPFQEKINDKEVVIVMTDTSPEQLTMLKDNLAHINVGQNPYEMG 295
                  N+     M    Q+     +V+ +  D + +    ++D        Q+ Y+MG
Sbjct: 221 -------NEPTAVGMGRALQQSGKGGKVIAIGFDGNQDLQGFVRDGTIQAIAVQSSYQMG 273

Query: 296 RQAILTLYKIVTKQQYEEVIYTPVTFCTPQNFNTCEKR 333
            + I TL  ++ ++   + + T V     QN ++ E +
Sbjct: 274 YKGIQTLVNVIERKPVSKQVDTGVMMVEKQNLDSSEAK 311