Pairwise Alignments

Query, 336 a.a., sugar-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) from Paraburkholderia bryophila 376MFSha3.1

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 67/333 (20%), Positives = 124/333 (37%), Gaps = 48/333 (14%)

Query: 5   LMLIIALGLLPISSVYGKELKLALVPKFYSVFFDQSKNGCIDAAAQIEGVECIYRGPE-- 62
           L L + L  L + +       + +V    S+ F Q+    I  +A    V+ + R P   
Sbjct: 5   LRLFVLLWSLAVMAPTAHASTIGVVLPGSSLVFYQTLLKGIQQSAHDHHVDLLIRNPSDG 64

Query: 63  --ISSVRLQDQVINQLIDEGVDGIAVAVTQSKYLVENSLKRAKEVGIPIVT-----YDSD 115
             +++  +Q ++I  ++ +GV G+ +A           L     V +P+       Y +D
Sbjct: 65  ESLNTPNIQLRIIEYMVTQGVSGVVLA--------PEPLAGDTRVSVPVPVILVDRYSAD 116

Query: 116 FDASINGDPKNFRLAYIGTDNFELGKSLGEELKKLRPNGGMLIMQSGRPDSPNLNLRLMG 175
           +D           ++ + TDNF  G+     L  +   G  + M    P+  +   R  G
Sbjct: 117 YDG----------ISTVYTDNFSAGRKAALSLVPVLKKGAKVAMLRLAPNVSSTVARESG 166

Query: 176 VRSALSGKKYDIPPGKLLNNEQGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIA 235
             S                 ++GW  V +    +      V   E V+K  P + D+  A
Sbjct: 167 FLSVA--------------RKEGWDVVIDTYVGYRPRDAEVLIAE-VIKSYPGRLDAVFA 211

Query: 236 VGGWAQNNDALYRDMIAPFQEKINDKEVVIVMTDTSPEQLTMLKDNLAHINVGQNPYEMG 295
                   + +    +   +     +   +V+ D  PE L  LK  + H  + Q+PY MG
Sbjct: 212 PA------EPIAYGALRVIETAAIGQRPRLVLFDWRPEFLEGLKKGIVHAAILQDPYRMG 265

Query: 296 RQAILTLYKIVTKQQYEEVIYTPVTFCTPQNFN 328
             A+ ++ + +        ++  V   TPQN N
Sbjct: 266 YLALASMVEALQGHPPPRTLFVDVVTVTPQNMN 298