Pairwise Alignments

Query, 419 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 380 a.a., hemolysin D from Cupriavidus basilensis FW507-4G11

 Score = 60.8 bits (146), Expect = 7e-14
 Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 27/274 (9%)

Query: 148 NQTLDMAKVDLEAAERERRRGELLIQSKLIGQID-------YEKGKDDLHKAKLKFEHAL 200
           NQ    AKV  E  +   R GE +   ++I +ID         + +  +  A+ ++E++ 
Sbjct: 82  NQASVKAKVAGEVQQVLVREGEAVRAGQVIVRIDATEYQAKVTQARGQMLAARGQYENSK 141

Query: 201 QEVALTKDTLT--------FEVKNKALEVERQQLAVRE--LERQVEALN---IKAPVNGI 247
           Q     ++ +         F+     L+V    L   +  LE   +AL    +K+P++G+
Sbjct: 142 QTFERNRELVAKGFISKTAFDNFQSNLDVAHANLDAAQGGLEVAQKALADTIVKSPLDGL 201

Query: 248 IGNWLTEQKNHLSANQPILTVVDLSAYEAELAVPESYADELGLGMEVELSF-GEVKLIGK 306
           +     +    +S +  ++ VVDL   E E  +P +    + +G  V+L   G  +  GK
Sbjct: 202 VAARAVQPGEKVSPDTRLIDVVDLRVLELEAPIPMADVARVAIGQAVQLDVEGSGRFEGK 261

Query: 307 LSSISPEVR--NREVTARVQFTQNDSLKLRQNQRISARVLLEHRDNVLMVKRGAFMTSGG 364
           L  I+P V    R +   V+   N   +LR        ++L H   V+ V   A    G 
Sbjct: 262 LVRINPAVSQGTRSIMVYVR-VDNPEARLRAGMFAQGALVLGHHAGVVAVPVTAVRNDGE 320

Query: 365 DE-VYQVEGDIATRRQIKLG--STSMSQVEVVEG 395
              VY VE D+   RQ+KLG    +   VE+  G
Sbjct: 321 RTFVYSVENDVLAERQVKLGIRDDASGLVEITSG 354