Pairwise Alignments

Query, 246 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., putative macrolide efflux ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  199 bits (505), Expect = 5e-56
 Identities = 103/218 (47%), Positives = 148/218 (67%), Gaps = 1/218 (0%)

Query: 1   MLSMKNISKVFKTDLVETHALRDFNLEVSEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHG 60
           M+S++ ++K F+    E  ALR  ++ + + EFVA+ GPSGSGK+T +NI G L+  T G
Sbjct: 1   MISLQALTKSFRMGDAEVQALRGVDIHIRQNEFVAIMGPSGSGKSTLMNIIGCLDRPTSG 60

Query: 61  DYFLDGINVSNLSDNKSAAVRNEKIGFIFQGFNLIPDLNLAENIEVPLRYRGFSAKERNR 120
           +Y L+G  V  LSD+  +AVRN +IGF+FQ F+L+P L+  +N+ +PLR+      +R  
Sbjct: 61  NYLLNGSAVGGLSDDALSAVRNREIGFVFQSFHLLPRLSALDNVLLPLRFSETPRGDRQH 120

Query: 121 RVEQALEQVGLAARMKHLPTQLSGGQQQRVAIARALAGEPRFLLADEPTGNLDSLMARQV 180
            +E  LE+VGL  R+ H P QLSGGQ+QRVAIARAL   P  LLADEPTG LDS  + ++
Sbjct: 121 AIE-LLERVGLGQRLDHRPNQLSGGQRQRVAIARALVNRPTLLLADEPTGALDSKTSVEI 179

Query: 181 MELLENINQAGTTIIMVTHDPELARRAQRNIQIVDGQV 218
           M L + ++ +G TI++VTH+ E+A  A R I++ DG V
Sbjct: 180 MALFDELHLSGQTIVLVTHEEEVAECAGRIIRMRDGVV 217