Pairwise Alignments

Query, 246 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 242 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Dechlorosoma suillum PS

 Score =  213 bits (541), Expect = 4e-60
 Identities = 109/219 (49%), Positives = 148/219 (67%), Gaps = 1/219 (0%)

Query: 1   MLSMKNISKVFKTDLVETHALRDFNLEVSEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHG 60
           ++  + I+K +     E  ALR  +LE++EG+FVAV GPSGSGK+T +NI G L+  + G
Sbjct: 11  LIQFRRITKTYGQGQAEFQALRGVDLEIAEGDFVAVMGPSGSGKSTVMNILGCLDSPSSG 70

Query: 61  DYFLDGINVSNLSDNKSAAVRNEKIGFIFQGFNLIPDLNLAENIEVPLRYRGFSAKERNR 120
           DY   G+ V +LS N+ A +R   +GF+FQGFNL+   +  EN+E+PL YRG S + R+R
Sbjct: 71  DYLFQGVPVQDLSRNQRALLRRHYLGFVFQGFNLLARTSAQENVELPLLYRGESPEARHR 130

Query: 121 RVEQALEQVGLAARMKHLPTQLSGGQQQRVAIARALAGEPRFLLADEPTGNLDSLMARQV 180
              +AL +VGL     H P +LSGGQQQRVAIARA+   P  LLADEPTGNLDS  + ++
Sbjct: 131 ASREALARVGLNGWEHHTPAELSGGQQQRVAIARAIVTNPLVLLADEPTGNLDSQRSHEI 190

Query: 181 MELLENIN-QAGTTIIMVTHDPELARRAQRNIQIVDGQV 218
           MELL  +N + G TI MVTH+P++A  A R +  VDG+V
Sbjct: 191 MELLVRLNREQGITIAMVTHEPDMAAYASRIVHFVDGRV 229