Pairwise Alignments

Query, 246 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 268 a.a., ABC transporter related (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  187 bits (475), Expect = 2e-52
 Identities = 98/218 (44%), Positives = 137/218 (62%), Gaps = 1/218 (0%)

Query: 4   MKNISKVFKTDLVETHALRDFNLEVSEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHGDYF 63
           ++ +SK ++        L + N+ V+ GEF+A+ GPSGSGK+T LN+   ++    G  F
Sbjct: 48  LQGVSKAYRRGAQVVPVLTNVNMTVAPGEFLALMGPSGSGKSTLLNLIAGIDRVDAGAVF 107

Query: 64  LDGINVSNLSDNKSAAVRNEKIGFIFQGFNLIPDLNLAENIEVPLRYRGFSAKERNRRVE 123
           +   +++ L D   A  R+  +GFIFQ +NLIP LN  EN+E+PL     S  ER  R  
Sbjct: 108 VGETDITTLDDADLARWRSRSVGFIFQFYNLIPVLNALENVELPLLLTPLSGHERRERAR 167

Query: 124 QALEQVGLAARMKHLPTQLSGGQQQRVAIARALAGEPRFLLADEPTGNLDSLMARQVMEL 183
            AL  VGL+ RM H P QLSGGQQQR AIARAL  +P  L+ADEPTG+LD + A +++ L
Sbjct: 168 TALAMVGLSDRMDHYPGQLSGGQQQRTAIARALVADPDILVADEPTGDLDRVSAGEILNL 227

Query: 184 LENINQA-GTTIIMVTHDPELARRAQRNIQIVDGQVCD 220
           ++ +N+  G TIIMVTHDP  A RA R + +  G++ D
Sbjct: 228 MDGLNRTMGKTIIMVTHDPRAAERAGRLLLLEKGELAD 265