Pairwise Alignments

Query, 399 a.a., ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 681 a.a., MacB family efflux pump subunit from Cupriavidus basilensis FW507-4G11

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 56/230 (24%), Positives = 110/230 (47%), Gaps = 16/230 (6%)

Query: 178 LGKSVYMGSQHYVVIGVVERLQTAWVDNSNVEYSSVLSVNYPADYKR---------YLV- 227
           LG+ + +G+  + VIGV+        D+   +Y +++ + Y A   R         Y+V 
Sbjct: 452 LGQQLLIGNSPFEVIGVMAE---RGADSGAQDYDNMVFIPYQAGRARVYQAQTQPDYVVV 508

Query: 228 -RAKASDIARLKEVIPEVLHKEYPSRVIEGFTTISERRIEAYRDHELMATVLTMMVVLLL 286
             A ++ +   +  +  +L   +  R        + R          M+ +L ++  + L
Sbjct: 509 QAASSAQVHAAEAAMHALLLARHGGREDFSIGNAAARLQAEVATRRSMSMMLGLIAAVSL 568

Query: 287 LITSLGVTGMVMFNIQRRTKQIGTRRALGAKKRDIISYFLVENYLLCLLGGTLGVLLAIQ 346
           L+  +GV  +++  ++ RT++IG R A GA++RDI+  FL E  ++ ++GG +G+   + 
Sbjct: 569 LVGGIGVMNVMLMTVRERTREIGIRMAAGARQRDILRQFLTEATMVTVMGGAVGLAAGLL 628

Query: 347 LGQQLMSLYSLPMLALSYPLFTVVGLFVVTTLAV-YLPARKAAKISPATA 395
           +G  L++   +P +     +    G  V T L   Y+PAR AA++ P  A
Sbjct: 629 VGAALIAA-GVPTVFSVSAMAGAFGCAVATGLVFGYMPARTAARLDPVVA 677