Pairwise Alignments

Query, 532 a.a., long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 569 a.a., long-chain-fatty-acid--CoA ligase from Ralstonia solanacearum GMI1000

 Score =  451 bits (1161), Expect = e-131
 Identities = 248/553 (44%), Positives = 342/553 (61%), Gaps = 32/553 (5%)

Query: 7   SQLELGKYSSLIDLIERTSQRFGDKTAYACLGKNSSFNEIERDSRYFAAYLQNNTNLKPG 66
           ++++  +Y SL  L+E + Q+  D  A  C+GK  ++ E++  SR  AA+LQ+   L PG
Sbjct: 15  AEIDASQYRSLAHLLEDSFQKNRDHRALECMGKVLTYGEVDALSRQLAAWLQSR-GLVPG 73

Query: 67  DRIAIQLPNITQFVIAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVLSDLLPT 126
            R+A+ +PN+ Q+ +A    LRAG ++VN NPLYT REL HQ  DSGA+A+V+L +   T
Sbjct: 74  ARVALMMPNVLQYPVALAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVILENFATT 133

Query: 127 LAKVVATTPIELVISTHPLDLID--------------PQVQPKTGLKN-VEFCHVLQQGA 171
           L +V+  TP++ ++     DL+                ++ P   L N + F   L+ GA
Sbjct: 134 LQQVLPNTPVKHIVVASMGDLLGGLKGMLVNFVVRSVKKMVPAWELPNCIRFNTALEAGA 193

Query: 172 LLPFTRFVPTLSDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRI----------GS 221
            L          D+A LQYTGGTTG+SKGA L H N++AN  Q ++ +          GS
Sbjct: 194 RLALKPTAVGPDDIAFLQYTGGTTGVSKGATLLHRNIVANVLQSEAWMQPGLDKPAHDGS 253

Query: 222 VISEGEDIF-VAPLPIYHIYAFMVNLVLYFECGGCSVLIPNPRDINGLIKTLAKYPFTGF 280
            ++ G+++  +  LP+YHI+A  V  +L    GG +VLIPNPRDI G IK L +Y F  F
Sbjct: 254 RLAPGDEVVTITALPLYHIFALTVCCLLSMRKGGLAVLIPNPRDIPGFIKVLKRYRFHMF 313

Query: 281 AGLNTLFVALCHQPEFKALNFSHLKITISGGTALTAAAANLWQQTTGNTISEGYGLSETS 340
             +NTL+ AL + PEF +++ S L++   GG A+  A A  W + TG  I EGYGLSETS
Sbjct: 314 PAVNTLYNALLNHPEFASVDCSRLRVANGGGMAVQEAVAKKWLEVTGCPIIEGYGLSETS 373

Query: 341 PVISLNAPGYQKI-GTIGKPVLGTEVKLLDESGNEVTQGTAGELAARGPQVMLGYWNNPQ 399
           P  + N        GTIG P+  TE+ + D+ G +   GT GE+  RGPQVM GYW  P 
Sbjct: 374 PSATCNPTDTDVFSGTIGVPLPSTEIAIRDDEGRDQPIGTPGEICLRGPQVMAGYWKRPD 433

Query: 400 ETANVMTPDGFFKTGDIAILNEEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIE 459
           ETA VM  DGFFKTGD+ +++  G+ +IVDRKKDMI+VSGFNVYPNE+E V+A  P ++E
Sbjct: 434 ETAKVMYADGFFKTGDVGVMDARGYTKIVDRKKDMILVSGFNVYPNEIEGVVAMCPGVLE 493

Query: 460 CAVVGVKDDHSGEAVKAFIVLKDDSQDHEKIKTAILNFCREQLTAYKLPKQIEFMSQLPK 519
            A VGV D HSGE VK F+V +D S   E+    +L FC+EQLT YK PK IEF ++LPK
Sbjct: 494 VAAVGVPDVHSGEVVKLFVVRRDPSLTEER----LLAFCKEQLTGYKRPKFIEFRNELPK 549

Query: 520 STVGKILRRELKN 532
           + VGKILRREL++
Sbjct: 550 TNVGKILRRELRD 562