Pairwise Alignments

Query, 532 a.a., long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 558 a.a., long-chain-fatty-acid--CoA ligase FadD from Pantoea sp. MT58

 Score =  508 bits (1307), Expect = e-148
 Identities = 265/545 (48%), Positives = 361/545 (66%), Gaps = 21/545 (3%)

Query: 4   DQESQLELGKYSSLIDLIERTSQRFGDKTAYACLGKNSSFNEIERDSRYFAAYLQNNTNL 63
           D  +++   +Y+SL+DL E+  +R+ D+ A+  +G+  S+ ++E  SR FAAYLQ    L
Sbjct: 12  DVPAEISADRYTSLVDLFEQAVKRYADQPAFINMGQKMSYRQLEEKSRAFAAYLQQQLGL 71

Query: 64  KPGDRIAIQLPNITQFVIAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVLSDL 123
           K GDR+A+ +PN+ Q+ +A  G LRAG+++VN NPLYT REL HQ NDSGA A+V++S+ 
Sbjct: 72  KAGDRVALMMPNLLQYPVALIGVLRAGMVVVNVNPLYTPRELRHQLNDSGASAIVIVSNF 131

Query: 124 LPTLAKVVATTPIELVISTHPLDLIDP--------------QVQPKTGLKN-VEFCHVLQ 168
             TL KVVA T +  VI T   D + P              ++ PK  L   + F HVL 
Sbjct: 132 AHTLEKVVAETAVRHVILTRMGDQLAPIKATLVNFIVKYVKKLVPKYHLPGAISFRHVLD 191

Query: 169 QGALLPFTRFVPTLSDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVISEGED 228
            GA L + R   +  DLA LQYTGGTTG++KGAMLTH NM AN  Q ++  G V+ +G++
Sbjct: 192 VGATLNYQRPTVSNDDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQTRATYGKVLRDGKE 251

Query: 229 IFVAPLPIYHIYAFMVNLVLYFECGGCSVLIPNPRDINGLIKTLAKYPFTGFAGLNTLFV 288
             V  LP+YHI+A  VN +L+ E GG ++LI NPRDI+G +K L K+PFT   G+NTLF 
Sbjct: 252 FVVTALPLYHIFALTVNGLLFLELGGQNLLITNPRDISGFVKELGKFPFTAITGVNTLFN 311

Query: 289 ALCHQPEFKALNFSHLKITISGGTALTAAAANLWQQTTGNTISEGYGLSETSPVISLNAP 348
           AL +  +F  L+FS L+++  GG A+    A  W++ TG+ + EGYGL+E SP++S+N  
Sbjct: 312 ALLNDEQFNKLDFSTLRLSAGGGMAVQKVVAERWEKLTGHYLLEGYGLTECSPLVSVNPY 371

Query: 349 GYQ-KIGTIGKPVLGTEVKLLDESGNEVTQGTAGELAARGPQVMLGYWNNPQETANVMTP 407
                 G+IG PV  T+V++LD+ GNEV  G  GEL  +GPQVMLGYW +P+ TA V+  
Sbjct: 372 DISCHTGSIGLPVPSTDVRILDDDGNEVPPGEPGELCIKGPQVMLGYWQHPEATAEVL-K 430

Query: 408 DGFFKTGDIAILNEEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKD 467
           +G+  +GDI  +++EGF +IVDRKKDMI+VSGFNVYPNE+E+VL  HP + E A +GV  
Sbjct: 431 NGWLHSGDIVTVDQEGFIRIVDRKKDMILVSGFNVYPNEIEDVLMQHPKVREAAAIGVPS 490

Query: 468 DHSGEAVKAFIVLKDDSQDHEKIKTAILNFCREQLTAYKLPKQIEFMSQLPKSTVGKILR 527
           D SGEAVK  IV KD S   E     +L+ CR QLT YK+PK IEF   LPK+ VGKILR
Sbjct: 491 DLSGEAVKVCIVKKDASLTKED----VLDHCRRQLTGYKVPKIIEFRDDLPKTNVGKILR 546

Query: 528 RELKN 532
           REL++
Sbjct: 547 RELRD 551