Pairwise Alignments

Query, 218 a.a., uracil-DNA glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 245 a.a., uracil-DNA glycosylase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  204 bits (519), Expect = 1e-57
 Identities = 106/223 (47%), Positives = 135/223 (60%), Gaps = 25/223 (11%)

Query: 18  QLIAFVNQERQVGKVIYPPKEDVFNAFKTTPLEQVRVVLIGQDPYHGPDQAHGLCFSVKR 77
           ++ + V   R+ G+V+YPP   VF A + TP ++VRVV++GQDPYHG  QAHGL FSV  
Sbjct: 24  EVFSRVEALRRKGRVVYPPSGQVFAALRATPWDRVRVVVLGQDPYHGEGQAHGLAFSVPE 83

Query: 78  GVKAPPSLANMYKELVNDIP------------------------GFHIPNHGDLTQWAEQ 113
           GV AP SL N+++E+  D+                         G   P   DLT+WA Q
Sbjct: 84  GVPAPRSLRNVFREIETDLGHASDEGKKRHADALPEKTAAGHDGGGLRPPSTDLTRWARQ 143

Query: 114 GILMLNTVLTVEQGQAHSHANAGWEIFTTEALKLLNAQERPIIFVLWGSHAIKKGAVITA 173
           G+L+LNTVLTVE GQAHSHA  GW+  T   ++ L    RP+ F+LWG HA   G  + A
Sbjct: 144 GVLLLNTVLTVEAGQAHSHARLGWQEVTAAVVEALGRCPRPMAFLLWGRHAAAYGEGLAA 203

Query: 174 PQHQILSGPHPSPLSAYRGFFGCGHFSKVNQLLMARGEAPIQW 216
             H +L   HPSPLSA+RGFFGC HFS+VN  L ARG  PI+W
Sbjct: 204 -HHLVLHAAHPSPLSAFRGFFGCRHFSQVNTWLRARGLDPIEW 245