Pairwise Alignments

Query, 218 a.a., uracil-DNA glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 263 a.a., uracil-DNA glycosylase from Ralstonia sp. UNC404CL21Col

 Score =  198 bits (504), Expect = 7e-56
 Identities = 109/223 (48%), Positives = 138/223 (61%), Gaps = 13/223 (5%)

Query: 3   WPAFIDHQRTQPYYQQLIAFVNQERQVGKVIYPPKEDVFNAFKTTPLEQVRVVLIGQDPY 62
           W A +     Q  + +L AFV+ ER  GK I+P   DVF A   T ++ VRVV++GQDPY
Sbjct: 39  WKAILTPCIAQTNWPELCAFVDGERAAGKPIFPT--DVFRALHLTSVDDVRVVILGQDPY 96

Query: 63  HGPD--------QAHGLCFSVKRGVKAPPSLANMYKELVNDIPGFHIPN-HGDLTQWAEQ 113
           HG          QAHGL FSV  GV+ PPSL N+YKE+  +  G  +P+  G+L  WA+Q
Sbjct: 97  HGTGTVDGREIPQAHGLAFSVPAGVRVPPSLRNIYKEIEAEF-GCKLPSTSGNLEGWAQQ 155

Query: 114 GILMLNTVLTVEQGQAHSHANAGWEIFTTEALKLLNAQERPIIFVLWGSHAIKKGAVITA 173
           G+L+LNTVLTVEQGQA SHA  GWE  T   L+ L       +F+LWGSHA  K A++ +
Sbjct: 156 GVLLLNTVLTVEQGQAASHAKRGWERITDCLLEQLARVGHKRVFMLWGSHAQAKRALL-S 214

Query: 174 PQHQILSGPHPSPLSAYRGFFGCGHFSKVNQLLMARGEAPIQW 216
             H +L  PHPSPLSA+RGF GCGHF   N  L A+ +  I W
Sbjct: 215 DGHLVLEAPHPSPLSAHRGFLGCGHFKTANDWLAAQHQPTIDW 257