Pairwise Alignments

Query, 318 a.a., glycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., glycerate dehydrogenase from Pseudomonas fluorescens FW300-N2C3

 Score =  239 bits (609), Expect = 8e-68
 Identities = 136/323 (42%), Positives = 189/323 (58%), Gaps = 15/323 (4%)

Query: 2   KIVVLDGETLNPGDLSWQAI-SDLGKFSCFARTPDAEIIPRAQDAEIVFTNKTPLDAKTL 60
           + V LD  +L+ GDL    + S  G+   FART   ++I R + A +  TNK  +DA+ +
Sbjct: 6   RAVFLDHPSLDLGDLDLNPLRSCFGELQLFARTTPDQVIERLKGATVAITNKIVIDAQAM 65

Query: 61  AQLPKLKYVGVLATGTNVVDIAAAKDLGIVVTNVPAYGHDAVAQMVFAHILHHTQAVAAH 120
           A  P+LK + + ATGTN VD+AAA+  GI V N   YG  +VAQ     +L+    +A +
Sbjct: 66  AASPELKLILISATGTNNVDLAAARHHGITVCNCQGYGTPSVAQHTLMLLLNLATRLADY 125

Query: 121 HQAVAAGQWTSCSDFCFTLMPLQSLKGKTLGLIGYGDIGQQVAKLALAFGMKVLV----N 176
             AV  G+W   S FC    P+  L+GKTLGL+G+G++G  V +LA AFGM+VL+     
Sbjct: 126 QNAVGEGRWQQASQFCLLDYPIVELEGKTLGLLGHGELGSAVGRLAEAFGMRVLLGQIPG 185

Query: 177 TRTEPAHLPQGVSWTSRDKVLKESDILSLHCPLTPETNELINAQTLELMKPQALLINTAR 236
               P  LP        +++L + D L+LHCPL   T   I A+ L L+KP A ++NTAR
Sbjct: 186 RPARPDRLP-------LEQLLPQVDALTLHCPLNEHTRNFIGARELALLKPGAFVVNTAR 238

Query: 237 GGLIDEAALAVALTQGRV-FAGVDVLSTEPPSMDNPLLSA--PNISTSPHNAWATKEARQ 293
           GGLIDE ALA AL  G +  A  DVLS EPP+  NPLL+   P +  +PHNAW ++EARQ
Sbjct: 239 GGLIDEQALAEALRSGHLGGAATDVLSVEPPTQGNPLLAGDIPRLIVTPHNAWGSREARQ 298

Query: 294 NLLNIATENLKSFLQGNIRNCVN 316
            ++   +EN + F  G  R  V+
Sbjct: 299 RIVGQMSENAQGFFSGTARRVVS 321