Pairwise Alignments

Query, 318 a.a., glycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., glycerate dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  391 bits (1005), Expect = e-113
 Identities = 193/314 (61%), Positives = 240/314 (76%)

Query: 3   IVVLDGETLNPGDLSWQAISDLGKFSCFARTPDAEIIPRAQDAEIVFTNKTPLDAKTLAQ 62
           I VLDG TLNPGDL W  ++D+G F    RTP   I+ RA  A  + TNKT LDA TL  
Sbjct: 4   ICVLDGFTLNPGDLDWSPLADIGPFDVHDRTPKELILSRAAGARFLLTNKTVLDAATLEA 63

Query: 63  LPKLKYVGVLATGTNVVDIAAAKDLGIVVTNVPAYGHDAVAQMVFAHILHHTQAVAAHHQ 122
           +P L+Y+GVLATGTNVVD+AAAK LGI VTNVP YG DAVAQM FAH+LHH   V+AHH 
Sbjct: 64  MPSLEYIGVLATGTNVVDVAAAKRLGIAVTNVPGYGPDAVAQMGFAHVLHHMSRVSAHHD 123

Query: 123 AVAAGQWTSCSDFCFTLMPLQSLKGKTLGLIGYGDIGQQVAKLALAFGMKVLVNTRTEPA 182
           AV  GQW+  +DFCFTL  L+SL GKTLGL+G+GDI +Q+A++ +AFGMK+LV++R++P 
Sbjct: 124 AVTQGQWSGQADFCFTLGQLESLSGKTLGLVGFGDIARQMARIGMAFGMKLLVHSRSKPT 183

Query: 183 HLPQGVSWTSRDKVLKESDILSLHCPLTPETNELINAQTLELMKPQALLINTARGGLIDE 242
            LP+G  + + D +  ESD+LSLHCPLT +T +++N ++L LMK  ALLINTARGGL+DE
Sbjct: 184 DLPEGAKFVALDTLFAESDVLSLHCPLTDDTRDMVNRESLALMKQGALLINTARGGLVDE 243

Query: 243 AALAVALTQGRVFAGVDVLSTEPPSMDNPLLSAPNISTSPHNAWATKEARQNLLNIATEN 302
            ALA AL  GRV AGVDVLSTEPP+ +NPLL A NIS +PHNAWAT +ARQ LL+IA EN
Sbjct: 244 VALADALNAGRVRAGVDVLSTEPPAPNNPLLHAANISITPHNAWATVKARQKLLDIAVEN 303

Query: 303 LKSFLQGNIRNCVN 316
           L++F +G   N V+
Sbjct: 304 LRAFSRGESVNRVD 317