Pairwise Alignments

Query, 318 a.a., glycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., D-2-hydroxyacid dehydrogenase family protein from Pseudomonas fluorescens SBW25-INTG

 Score =  151 bits (382), Expect = 2e-41
 Identities = 100/313 (31%), Positives = 159/313 (50%), Gaps = 16/313 (5%)

Query: 4   VVLDGETLNPGDLSWQAISDLGKFSCFARTP--DAEIIPRAQDAEI--VFTNKTPLDAKT 59
           V+ D + +  G + W  ++ +G+       P   A +I R Q  E+  V   ++  D   
Sbjct: 7   VIDDWQNVASGVVDWSVLAAVGQVHFLHDYPADTATMIERLQGFEVICVMRERSTFDKAL 66

Query: 60  LAQLPKLKYVGVLATGTNVVDIAAAKDLGIVVTNVPAYGHDAVAQMVFAHILHHTQAVAA 119
           L  LP LK +         +DI AAK LGI V    +Y H A  ++ +A I+  T+ + A
Sbjct: 67  LQGLPALKLLVTGGMRNAAIDIPAAKALGIQVCGTDSYKH-AAPELTWALIMASTRDLVA 125

Query: 120 HHQAVAAGQWTSCSDFCFTLMPLQSLKGKTLGLIGYGDIGQQVAKLALAFGMKVLV--NT 177
              ++ AG W               L GKTLG++G G IGQ+VA+ A  FGM+V+     
Sbjct: 126 EAHSLRAGHWQIGLG--------GDLYGKTLGILGLGSIGQKVAQFAQVFGMRVIAWSEN 177

Query: 178 RTEPAHLPQGVSWTSRDKVLKESDILSLHCPLTPETNELINAQTLELMKPQALLINTARG 237
            T       GV+W S+  + +++DIL++H  L+  T  L++AQ L  MKP A L+NTARG
Sbjct: 178 LTPERAAESGVTWVSKQALFEQADILTVHLVLSDRTRGLVDAQALGWMKPSARLVNTARG 237

Query: 238 GLIDEAALAVALTQGRVF-AGVDVLSTEPPSMDNPLLSAPNISTSPHNAWATKEARQNLL 296
            ++DE AL  AL  GR+  A +DV + EP   D+P    P +  +PH  + +++  +   
Sbjct: 238 PIVDEQALVQALESGRLAGAALDVYAQEPLPADHPFRRLPTVLATPHVGYVSEQNYRQFY 297

Query: 297 NIATENLKSFLQG 309
               E+++++  G
Sbjct: 298 AQMIEDIQAWANG 310