Pairwise Alignments

Query, 96 a.a., ISSod1, transposase OrfA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 99 a.a., Transposase IS3/IS911 from Pseudomonas syringae pv. syringae B728a

 Score = 59.7 bits (143), Expect = 8e-15
 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 10/96 (10%)

Query: 4  KKSHKSYPQAFKDEAVLMVLEQGYSVADAAKSLGVSTSLLYNWKEKHEALQQG------I 57
          K     Y   FK EAV +V + G ++A AA+SLG+S   L+NW + H   +QG      I
Sbjct: 5  KTDRVKYTLEFKLEAVRLV-DTGLTLAAAARSLGISDQTLFNWVKAH---RQGRLTGADI 60

Query: 58 TLEESERDELKRLRRENKELRMEKEILKKASAFFAR 93
               E+ E+ RLR E   ++ME++IL+KA+A+FA+
Sbjct: 61 KSVTPEQMEISRLRAELARVKMERDILEKATAYFAK 96