Pairwise Alignments

Query, 378 a.a., secretion protein, HlyD family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 378 a.a., secretion protein HlyD from Klebsiella michiganensis M5al

 Score =  348 bits (894), Expect = e-100
 Identities = 179/364 (49%), Positives = 244/364 (67%), Gaps = 2/364 (0%)

Query: 13  IFKVFKIPMNKWTVPTAVLGGVFLIGALLLIMNYNHPYSRFAREYYVTIPITPAVKGLVI 72
           IFK+FKIP+NKWTVPTA LGGVF++ AL+L+MNYNHPY+  A++  ++IPITP V G+V 
Sbjct: 16  IFKIFKIPVNKWTVPTAALGGVFIVSALILLMNYNHPYTFTAQKAVISIPITPQVTGVVS 75

Query: 73  SVDVKPNTFIKQGDVLFRIDPTPYQAVVKTKKAALLAAEQEVPQLKAAWESAKANVARVA 132
           SV  K N  +K+G+VLF IDP  YQA V   +A L+ A   +  LKA    A+AN  RV+
Sbjct: 76  SVTDKANQRVKKGEVLFTIDPARYQARVDRLQADLVTALHSINTLKAQLSEAQANTTRVS 135

Query: 133 ADRERNKSAYDRYEQGHRKGGANSPFTALELDNKRQLYLASDAQLTAVQAEELRARLAYE 192
           A+R+R    Y RY +G +     +PF+  ++DN RQ YLA DA +    AE+ + +   +
Sbjct: 136 AERDRLYKDYQRYLKGSQ--ARVNPFSESDIDNARQNYLAQDAMVKGSVAEQAQIQSQLD 193

Query: 193 SNVDGVNSKVAGLQGDLENALYNLEQTVVRAPADGIVTQMALRPGAMAVPLPLRPVMNFI 252
           S ++G  S+V  L+  L  A YNL+QT VRAP+DG +TQ+ +RPG  A  LPLRPVM FI
Sbjct: 194 SIINGEQSQVVSLRAQLAEAKYNLDQTTVRAPSDGYITQVLIRPGTYAASLPLRPVMVFI 253

Query: 253 PDEQRYFAGAFWQNSLLRLQEGDEAEVVLDAVPGKVFKGKVAKVLPAMAEGEIQMNGTLQ 312
           P ++R     F QNSLLRL++GD+AE V +A+PG+VF+GK+  +LP +  G  Q  GTLQ
Sbjct: 254 PQQKRLIVAQFRQNSLLRLEKGDDAEAVFNALPGQVFRGKLVSILPVVPGGTYQAQGTLQ 313

Query: 313 SSNQLFQTGRVIVLIDIEDDAIRREFPAGVAGQVAVYTEHFHHVAVMRKVLLRMQGWLNY 372
           +      T  V+  I++E DA     P G+  QVAVY++HF HV+VMRKVLLRM  W++Y
Sbjct: 314 ALTVTPGTDGVLATIELEPDAAVDALPDGIYAQVAVYSDHFTHVSVMRKVLLRMTSWMHY 373

Query: 373 LFFD 376
           L+ D
Sbjct: 374 LYLD 377