Pairwise Alignments

Query, 378 a.a., secretion protein, HlyD family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 355 a.a., secretion protein from Klebsiella michiganensis M5al

 Score =  110 bits (274), Expect = 8e-29
 Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 12/320 (3%)

Query: 59  VTIPITPAVKGLVISVDVKPNTFIKQGDVLFRIDPTPYQAVVKTKKAALLAAEQEVPQLK 118
           V  P++  V G V  V V  N+ +K+GD+L+ +DPTP+   V+  + AL  A+    QL 
Sbjct: 44  VVTPVSSRVSGYVSHVYVHNNSQVKKGDLLYELDPTPFINKVEAAQIALEQAKLSNQQLD 103

Query: 119 AAWESAKANVARVAADRERNKSAYDRYEQGHRKGGANSPFTALELDNKRQLYLASDAQLT 178
           A   SA+AN+         +K  +DRY++       +      +LD  R  +  S+  ++
Sbjct: 104 AQIASARANLRTAQYTARNDKVTFDRYQRLSTMQNVSQS----DLDKVRTTWQTSEQSVS 159

Query: 179 AVQAEELRARLAYESNVDGVNSKVAGLQGDLENALYNLEQTVVRAPADGIVTQMALRPGA 238
           A+ A      +      D  N  +   +  LE A  NL  T VRA  DG+V+ + L PG 
Sbjct: 160 ALNASIQNLLIQRGERDDARNVTLQKYRNALEEAQLNLGWTKVRAETDGMVSNLQLNPGL 219

Query: 239 MAVPLPLRPVMNFIPDEQRYFAGAFWQNSLLRLQEGDEAEVVLDAVPGKVFKGKVAKVLP 298
            A      P++  + ++    A  F + SL       +A VV DA+PGKVF+  V     
Sbjct: 220 YAT--AATPLLALVSNQTDIVAD-FREKSLRHTGVNTDAAVVFDALPGKVFRAHVTSSDA 276

Query: 299 AMAEGEIQMNGTL----QSSNQLFQTGRVIVLIDIEDDAIRREFPAGVAGQVAVYTEHFH 354
            +  G+ ++NG L    QS+  +    R+ + + + D+ + +  P G    V +Y     
Sbjct: 277 GILAGQEEVNGQLSQPEQSTRWVRDAQRMRIHVAL-DEPLDKPLPTGARATVQLYNSDGP 335

Query: 355 HVAVMRKVLLRMQGWLNYLF 374
                    + +   L+Y++
Sbjct: 336 FARTFAGAQIHLVSLLHYVY 355