Pairwise Alignments

Query, 335 a.a., sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 332 a.a., sulfate/thiosulfate-binding protein from Pseudomonas stutzeri RCH2

 Score =  310 bits (794), Expect = 3e-89
 Identities = 159/325 (48%), Positives = 214/325 (65%), Gaps = 5/325 (1%)

Query: 8   ALLGTLLLGASLNVAAADQTLLNSSYDISRELFNAYNPVFAKHWQEKTGKTVEIKQSHAG 67
           A L + L+G+    A A  TLLN SYD +REL+  +N  F KHWQ +  + V+++QSH G
Sbjct: 9   AALASALIGSH---ALAADTLLNVSYDPTRELYVEFNAAFNKHWQAQGHEPVKVQQSHGG 65

Query: 68  SSAQARSILQGLPADVVTFNQVTDVQILHDRGKLIPENWQQLLPNASSPYYSTIAFLVRK 127
           S  QAR+++ GL ADVVT     D+  LH  GKLIPE+WQ  LP+AS+PY STI FLVRK
Sbjct: 66  SGKQARAVIDGLRADVVTLALAGDIDELHRLGKLIPEDWQTRLPDASTPYTSTIVFLVRK 125

Query: 128 GNPKQISDWGDLAKDDVKLVFPNPKTSGNARYTYLAALGFAQKNYGKDNEASLDAFLKKF 187
           GNPK I DW DL K  V+++ PNPKTSG AR+ +LAA  +AQ+ +G + +A    F+   
Sbjct: 126 GNPKGIKDWDDLVKPGVEVITPNPKTSGGARWNFLAAWAYAQQKFGTEEQA--QEFVGTL 183

Query: 188 LGNVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADGYQVVVPKTSILAEFP 247
             NV V DTG RG+T +FV  GIGDVL+ +E+E     ++ G + ++++ P  SILAE P
Sbjct: 184 YKNVPVLDTGARGSTVTFVNNGIGDVLLAWENEAFLALKEQGGENFEIIAPSLSILAEPP 243

Query: 248 VAVVEKNAKRNGTQELATEYLSYLYSEESQRLLAGFNYRVHNEKVIAEFTKQFPTVELMT 307
           VAVV+KN +R GT+E+A  YL+YLYSEE QR+ A   YR  N  V AEF  QFP ++L+T
Sbjct: 244 VAVVDKNVERKGTREVAEAYLNYLYSEEGQRIAAKNFYRPRNASVAAEFKDQFPALKLVT 303

Query: 308 VEQIIGNWDNAMKTQFANGAKLDQL 332
           +++  G W  A    F +G   DQ+
Sbjct: 304 IDRDFGGWKTAQPKFFNDGGVFDQI 328