Pairwise Alignments

Query, 178 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 185 a.a., hypothetical protein from Pseudomonas stutzeri RCH2

 Score = 56.2 bits (134), Expect = 3e-13
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 29/189 (15%)

Query: 9   LFITMVF-LGACS-TKPKNDYDLNYDFKTLQSFSQLAPQPN---DDP-----LSAQRIKT 58
           L I ++F L AC   + + D+D   DF   ++++   P      DDP     L+ QRI+ 
Sbjct: 6   LLIPLLFALAACQGPQVQRDFDPTRDFSAYRAWTWQEPALQYRPDDPRIKSDLTEQRIRG 65

Query: 59  EISQQLRQKGFTESQSSP--DFSV-AYGLLTQDKPKDSGLSIGLGTGSFGRSGGIGIGTS 115
            I++QL Q+G   + +    D  V A+ ++ Q   + +  S   G   +G  GG      
Sbjct: 66  AIAEQLDQQGLRPATAGKVADIKVQAWYIVDQRTQQYTTTSGAWGNPWYGYWGG------ 119

Query: 116 VGVPLGSDTAKIQ----TIQIDIIDTKTNKLIWRGSDSFDFDAGG---DKKAQDTAKAVS 168
              P+ +DT  I     T+QID+ D    KL+WRGS      +     D++A +  + V 
Sbjct: 120 ---PMFTDTRTIDYQVGTLQIDLYDAGDGKLVWRGSAEQVLRSRPGTPDERAGNIRELVM 176

Query: 169 RILAQFPPQ 177
           R+L+Q+PP+
Sbjct: 177 RVLSQYPPR 185