Pairwise Alignments

Query, 237 a.a., transcriptional regulatory protein RstA, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 238 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  218 bits (554), Expect = 1e-61
 Identities = 117/233 (50%), Positives = 158/233 (67%), Gaps = 5/233 (2%)

Query: 5   QSPHRVLLVEDDVRLANLIVDYLKSHG-MHVEVERRGDTVLTRLINYKPDIILLDIMLPG 63
           Q   R+L+VEDD RLA L  +YL+ +G   V +E  G   + R+I  +PD+++LD+MLPG
Sbjct: 3   QETWRILIVEDDRRLAELTQEYLQGNGGFEVSIESDGACAVDRIIEERPDLVVLDLMLPG 62

Query: 64  IDGLSLCEKLPDYFAGPILLMSALGSSEDQIKGLELGADDYVVKPVDPALLVARINNLLR 123
            DGLS+C ++ D + GPIL+++A     DQ+ GLE GADDYV KPV P LL+ARI  LLR
Sbjct: 63  EDGLSICRRVRDRYDGPILMLTARADDLDQVLGLETGADDYVCKPVRPRLLLARIRALLR 122

Query: 124 RQNQPPQAESHC--LTFGKLSIDPHTHAIRLDNKEVDLTSHEFELLWLLASQAGQVLSRQ 181
           R  QPP+A ++   L FG L ID       L  ++++LT  EF+LLWLL S  G++LSR+
Sbjct: 123 R--QPPEASTNAKRLQFGPLVIDSALREAWLREQQIELTGAEFDLLWLLTSNPGRILSRE 180

Query: 182 YIYQLLLNIDFDGKDRKIDVRISRLRKKLNDNIETPFRIKTVWGQGYLFAPEA 234
            I+  L  I++DG+DR IDVRISR+R K+ D+ E P  IKTV G+GYLF  EA
Sbjct: 181 EIFAELRGIEYDGQDRSIDVRISRIRPKIGDDPEHPRLIKTVRGKGYLFVSEA 233