Pairwise Alignments

Query, 237 a.a., transcriptional regulatory protein RstA, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 234 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  171 bits (432), Expect = 1e-47
 Identities = 97/226 (42%), Positives = 139/226 (61%), Gaps = 4/226 (1%)

Query: 6   SPHRVLLVEDDVRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGID 65
           S  ++LL+EDD+ LA L + YL   G  +        V     + + D+I+ DIMLP  D
Sbjct: 2   SKPKILLIEDDLDLAELTLLYLTQQGFDLTHSESAQAVANLPADLRFDLIICDIMLPDSD 61

Query: 66  GLSLCEKLPDYFAGPILLMSALGSSEDQIKGLELGADDYVVKPVDPALLVARINNLLRRQ 125
           G SL  +L   +   I+ M+AL   ++QIKGLELGA DY+VKPV+P LLVARI   LR+ 
Sbjct: 62  GFSLFAELQARYQCVIIFMTALDGQQEQIKGLELGASDYIVKPVNPELLVARIKANLRK- 120

Query: 126 NQPPQAESHCLTFGKLSIDPHTH-AIRLDNKEVDLTSHEFELLWLLASQAGQVLSRQYIY 184
             P +A    +T    +ID HTH  + + +++  +T+ EF+LLW+ A   G+VLSR+Y++
Sbjct: 121 -LPSEAPPQSVTLHDFTID-HTHQQLTIGDRQQKVTTQEFDLLWIFAQHPGKVLSREYLF 178

Query: 185 QLLLNIDFDGKDRKIDVRISRLRKKLNDNIETPFRIKTVWGQGYLF 230
           +  +   +DG DR ID++ISRLRKK++        IKTV GQGYLF
Sbjct: 179 EQYVGRPYDGLDRAIDLKISRLRKKIDSYQIDGLTIKTVHGQGYLF 224