Pairwise Alignments

Query, 257 a.a., conserved hypothetical protein TIGR00726 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 267 a.a., peptidoglycan editing factor PgeF from Ralstonia solanacearum GMI1000

 Score =  209 bits (532), Expect = 5e-59
 Identities = 125/276 (45%), Positives = 156/276 (56%), Gaps = 42/276 (15%)

Query: 2   LMHDWPVPDNVAIAMTDRHGGVSLAPYD-------SLNLGLHVGDIPQQVLVNRGILAKQ 54
           ++ DWP P +V    T R GGVS  PY         LNLG HVGD P  V  NR +L  +
Sbjct: 8   IVPDWPAPPSVRALSTTRQGGVSTGPYGLAGGLPGGLNLGRHVGDGPDAVTQNRRLL--R 65

Query: 55  LGLATEPVWLEQVHGTHVIDLADIKSVDLAPEAQAQQASISVSHPHIADASYTNLAGRVC 114
             L  EP W+EQVHGT V DL                    +  P +ADA+     GRVC
Sbjct: 66  AVLPAEPAWMEQVHGTVVADLDQ-----------------PLPAPVVADAAIAASPGRVC 108

Query: 115 VVMTADCLPVLLCNQQGTEVAAAHAGWRGLCDGVIEASVAHFTSKPNEL--------IAY 166
           VVMTADCLPVLLC+ +G  V AAHAGWRGLC GVIE +V   T              +A+
Sbjct: 109 VVMTADCLPVLLCDARGVTVGAAHAGWRGLCSGVIEQTVERMTDALRACGQEADPTWLAW 168

Query: 167 LGPAIGPMAFEVGAEVRDAFM-----VKDPNAESCFI--ARGDKYLADIIGLAKLRLTKL 219
           LGPAIGP  FEVGAEVR AF+      + P   + F   A   K+LAD+  LA+LRL + 
Sbjct: 169 LGPAIGPDCFEVGAEVRQAFIDAARPDELPATRAAFAEGAADGKFLADLYALARLRLARA 228

Query: 220 GVSQVYSADICTVSNMD-YFSYRRDKITGRMASLIW 254
           G   V+   +CT+++ + ++SYRRD+ TGRMA+LIW
Sbjct: 229 GCRDVHGGGLCTMTDAERFYSYRRDRTTGRMATLIW 264