Pairwise Alignments

Query, 949 a.a., peptidase, M16 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 456 a.a., peptidase M16 from Pseudomonas aeruginosa PA14

 Score =  196 bits (499), Expect = 2e-54
 Identities = 131/424 (30%), Positives = 220/424 (51%), Gaps = 17/424 (4%)

Query: 51  PYKKYQLANGLTVILHQDRSDPLVHVDVTYHVGSARELAGRSGFAHLFEHMMFQGSEHVA 110
           P  ++ L NGL VI+ +D   P+V   + Y +GS+ E  G +G +H  EHMMF+GS  + 
Sbjct: 29  PTHEFSLDNGLKVIVREDHRAPVVVSQLWYRIGSSYETPGLTGLSHALEHMMFKGSRKLG 88

Query: 111 DEQHFEVVTEAGGTLNGSTNTDRTNYFETVPNNQLEKMLWLESDRMGFLLPALTSEKFEV 170
             +   V+ + G   N  T  D T Y++ +  ++L   L +E+DRM  L  +L +++F+ 
Sbjct: 89  PGEASRVLRDLGAEENAFTTDDYTAYYQVLARDRLPVALEMEADRMAHL--SLPADQFKS 146

Query: 171 QRETVKNERAQRIDNQPYGRMSERFNQAMFPVGHPYSWPVIGWPEDLNRATVDDVKHFFQ 230
           + E +K ER  R D+ P     ERF  A +P    Y  P IGW  DL R T+DD++H+++
Sbjct: 147 EIEVIKEERRLRTDDNPNALAFERFKAAAYPAS-GYHTPTIGWMADLQRMTIDDLRHWYE 205

Query: 231 RWYGPNNATLTIGGDF--DELQALAWVNKYFGEIPRGPEVQPEPKTLVTIDK-TRYLSME 287
            WY PNNATL + GD   DE++ LA   +YFGEIP   ++ P  K L   +   R L + 
Sbjct: 206 SWYAPNNATLVVVGDVTADEVKTLA--KRYFGEIP-WRQLPPARKPLELAEPGERRLKLY 262

Query: 288 DNVHLPLIRIGF--PTV-YANHPDEA-ALDLLANILGGGKTSLVYKNLVKDGYAVQASVS 343
               LP + +GF  P++  + +P E  AL L+  +L GG ++ +   L + G  + A  S
Sbjct: 263 VRTQLPNLIMGFNVPSLGSSENPREVNALRLIGALLDGGYSARLASRLER-GEELVAGAS 321

Query: 344 QPCQELACQMSIYALA---NPQKGVTLAELEQRILASINEFEQRGVTDDDLQKVKVQFEA 400
                     S++ L+   N QKG TL ++E  +   +++ +Q   +  ++++V+ Q  A
Sbjct: 322 TYYDAFNRGDSLFVLSATPNVQKGKTLEQVEAGLWKQLDDLKQNPPSAAEIERVRAQMIA 381

Query: 401 DTIFGLQSVKGKVSNLALNQTLFGKPNKIASDLARYANVTKDDVMRVFKKYIKDKPMVVM 460
             ++   S+  + S++   +++      I  DL     VT DD+ +  + Y     + + 
Sbjct: 382 GMVYEKDSIAAQASSIGQLESVGLSWKLIDQDLEALKAVTPDDIQKAARTYFTPSRLTLA 441

Query: 461 SVVP 464
            V+P
Sbjct: 442 QVLP 445



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 69/415 (16%), Positives = 160/415 (38%), Gaps = 19/415 (4%)

Query: 526 LANGIEVMGTQSIETPTVELVIYLNGGHRLVPVEKAGLASLTAEMLNESTQKRSSEQLSQ 585
           L NG++V+  +    P V   ++   G         GL+     M+ + ++K    + S+
Sbjct: 35  LDNGLKVIVREDHRAPVVVSQLWYRIGSSYETPGLTGLSHALEHMMFKGSRKLGPGEASR 94

Query: 586 ALEVLGSTVD-FSASEYQSTIKVSALTEHLDETLAILEEKLFEPAFNEADF-ARVKQQQL 643
            L  LG+  + F+  +Y +  +V A  + L   L +  +++   +     F + ++  + 
Sbjct: 95  VLRDLGAEENAFTTDDYTAYYQVLA-RDRLPVALEMEADRMAHLSLPADQFKSEIEVIKE 153

Query: 644 QQIQHMQSNPSYQASAALYSLLYGNNNALGVSDTGTLDSVAALTLADVQAFYAEQYRGAN 703
           ++      NP+  A     +  Y   +       G +  +  +T+ D++ +Y   Y   N
Sbjct: 154 ERRLRTDDNPNALAFERFKAAAY-PASGYHTPTIGWMADLQRMTIDDLRHWYESWYAPNN 212

Query: 704 AKIITVANLPE---TALLPKLAGLSQWQGEASVLPPLK-SFPALKGGIIYL-IDKPGAAQ 758
           A ++ V ++       L  +  G   W+       PL+ + P  +   +Y+    P    
Sbjct: 213 ATLVVVGDVTADEVKTLAKRYFGEIPWRQLPPARKPLELAEPGERRLKLYVRTQLPNLIM 272

Query: 759 --SVINIAKRALPYDATGNYFKSYLMNYPLGGAFNSRINLNLRENKGYTYGARTNFSGTG 816
             +V ++     P +         L+   L G +++R+   L   +    GA T +    
Sbjct: 273 GFNVPSLGSSENPREVNA----LRLIGALLDGGYSARLASRLERGEELVAGASTYYDAFN 328

Query: 817 EVGEFI---ASSDVRTDVTAKAVNEFI-NEIKAYQQQGMTDTELTFMRNSVSQGQALDYE 872
                    A+ +V+   T + V   +  ++   +Q   +  E+  +R  +  G   + +
Sbjct: 329 RGDSLFVLSATPNVQKGKTLEQVEAGLWKQLDDLKQNPPSAAEIERVRAQMIAGMVYEKD 388

Query: 873 TPYQKAGFMRMIQRYQLSQDFTTEQDKIINTVTKDELNALAASELDISKMIILVV 927
           +   +A  +  ++   LS     +  + +  VT D++   A +    S++ +  V
Sbjct: 389 SIAAQASSIGQLESVGLSWKLIDQDLEALKAVTPDDIQKAARTYFTPSRLTLAQV 443