Pairwise Alignments

Query, 949 a.a., peptidase, M16 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 944 a.a., Predicted Zn-dependent peptidases from Sphingomonas koreensis DSMZ 15582

 Score =  362 bits (930), Expect = e-104
 Identities = 279/941 (29%), Positives = 442/941 (46%), Gaps = 31/941 (3%)

Query: 13  AVAISAALAGCATETSTKLPAGVTLIENVQLTDSQVGIPYKKYQLANGLTVILHQDRSDP 72
           A+ +SAAL   A       PA    I+   L        Y +  L NGL V   +D S  
Sbjct: 7   ALYLSAALLPFAAHAQDAAPAPAKEIKVAPLA-------YTERTLPNGLKVYAIRDTSTA 59

Query: 73  LVHVDVTYHVGSARELAGRSGFAHLFEHMMFQGSEHVADEQHFEVVTEAGGTLNGSTNTD 132
            V V V Y VGS  + AG+SGFAH+FEH+MF+G++++ DEQ   +  + GG  N STN+D
Sbjct: 60  NVSVQVWYDVGSKDDPAGKSGFAHMFEHLMFKGTKNLVDEQMDRLTEDVGGYNNASTNSD 119

Query: 133 RTNYFETVPNNQLEKMLWLESDRMGFLLPALTSEK-FEVQRETVKNERAQRIDNQPYGRM 191
            TNYFE VP N LE++L+ E+DRM  L+    SEK F  +R+ VK E   R+   PYG++
Sbjct: 120 YTNYFEVVPANHLERLLFAEADRMASLV---VSEKVFASERDVVKEELRNRVLASPYGKL 176

Query: 192 SERFNQAMFPVGHPYSWPVIGWPEDLNRATVDDVKHFFQRWYGPNNATLTIGGDFDELQA 251
              +   +    HPY+ P IG  EDL+ AT+ D++ F   +Y P+NA L + G+FD  Q 
Sbjct: 177 FYIYFPNISYSTHPYARPGIGSIEDLDAATIGDIRAFHATYYRPDNAVLVVAGNFDPAQL 236

Query: 252 LAWVNKYFGEIPRGPEVQPEPKTLVT----IDKTRYLSMEDNVHLPLIRIGFPTVYANHP 307
             WV+KYF  I R    +P P+  V        TR    E N  LP + + +     N P
Sbjct: 237 DKWVDKYFAGIARPN--RPIPRVTVAEPPRTTATRQTVYEANTPLPAVLLSYQLPPDNDP 294

Query: 308 DEAALDLLANILGGGKTSLVYKNLV-KDGYAVQASVSQPCQELACQMSIYALANPQKGVT 366
           D  AL +L  IL GG+ S +Y+NLV +D  A QA      ++     ++YA+     G +
Sbjct: 295 DTPALAVLDGILSGGENSRLYRNLVYRDQLAAQADTFLDTRQSTGSYAMYAIL--AGGKS 352

Query: 367 LAELEQRILASINEFEQRGVTDDDLQKVKVQFEADTIFGLQSVKGKVSNLALNQTLFGKP 426
             + E+ +   I +     V++ +L + K +    ++   ++ +GK S LA +  + G P
Sbjct: 353 AEDGEKAMRREIADLRDTPVSEAELAEAKNEILTASLKSRETAEGKASTLANSIIVGGNP 412

Query: 427 NKIASDLARYANVTKDDVMRVFKKYIKDKPMVVMSVVPQGMTALVAHPDNFIAQMLPVAQ 486
                 LA  A VT  DV RV +KY+ D     +  +P  M          +A  + VA 
Sbjct: 413 KAADQQLAAVARVTAADVQRVARKYLGDNQSAALIYLPDAMAKGAKGDTIAVASTVKVAP 472

Query: 487 TAVEGELPNAKLVSSFDRSKMPATGAASVLKVPQIWTSKLANGIEVMGTQSIETPTVELV 546
             V  ++          R  +P  GA     +P+   ++LANG+ V+  +  + P V   
Sbjct: 473 LVVPSDVVIHTQAPEGQRVAVPNPGAPVSPVIPKAIETRLANGLRVIVVEKRDLPIVTAT 532

Query: 547 IYLNGGHRLVPVEKAGLASLTAEMLNESTQKRSSEQLSQALEVLGSTVDFSASEYQSTIK 606
           +    G    P  KAG A+L A++L + T  RS+EQ++Q +E LG ++   A    +   
Sbjct: 533 VVAPAGGGSDPNGKAGTAALAADLLTKGTATRSAEQIAQQVESLGGSIGAGADWDAAFAT 592

Query: 607 VSALTEHLDETLAILEEKLFEPAFNEADFARVKQQQLQQIQHMQSNPSYQASAALYSLLY 666
           V+   + +D  LAIL +    P F +A+  R ++Q L  +     +P   +       ++
Sbjct: 593 VTVKADQIDPALAILADVARNPVFAQAEIDRARKQALDGVAVQLKDPGALSGIVASRTVF 652

Query: 667 GNNNALGVSDTGTLDSVAALTLADVQAFYAEQYRGANAKIITVANLPE---TALLPKLAG 723
           G   A G   +GT+ S+  +T  D+ + Y   +  + A ++ V ++ +   TAL  KL G
Sbjct: 653 G-EQAYGNMLSGTVTSLPKITRDDITSAYRNAWIPSQAALVVVGDIAQKDATALAQKLFG 711

Query: 724 LSQWQ-GEASVLPPLKSFPALKGGIIYLIDKPGAAQSVINIAKRALPYDATGNYFKSYLM 782
              W+ G    +P   S  A     + ++D PGA Q+ + IA+  +   A  +++ + + 
Sbjct: 712 --DWKTGVHDGVPDGDS--ARAAPRVVVVDMPGAGQAGVVIARPGIA-RADKDFYAAQVA 766

Query: 783 NYPLGGAFNSRINLNLRENKGYTYGARTNFSGTGEVGEFIASSDVRTDVTAKAVNEFINE 842
           N  LG  F SR+N  +R  +G  YGA ++       G   AS+  +     + V+    E
Sbjct: 767 NATLGVGFTSRLNREIRIKRGLAYGAGSSVDARRAPGIVTASTQTKNPSAPEVVSLIAAE 826

Query: 843 IKAYQQQGMTDTELTFMRNSVSQGQALDYETPYQKAGFMRMIQRYQLSQDFTTEQDKIIN 902
           +K   +  +   EL   +  +        E     AG +       +  D  +     I 
Sbjct: 827 MKKLGETPVPAAELDSRKAVLVGSFGRRIERTDGIAGALADYVAEGVPLDTLSTYIPSIQ 886

Query: 903 TVTKDELNALAASELDISKMIILVVGDKAKIEADLATLGYP 943
            V    + A A   LD ++  I+VVGD AK+  D     +P
Sbjct: 887 GVDPARVQAAAKKVLDPARASIIVVGD-AKLFVDELRKAHP 926