Pairwise Alignments

Query, 346 a.a., ISSod13, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 345 a.a., integrase from Burkholderia phytofirmans PsJN

 Score =  421 bits (1081), Expect = e-122
 Identities = 202/335 (60%), Positives = 254/335 (75%), Gaps = 1/335 (0%)

Query: 8   IIKHKTGLLNLAEELSNVSRACKVMGVSRDTFYRYRELVDDGGVDALIEKSRRSPNLKNR 67
           +I+ K G+L LA +L NVS+AC+VMG SRD+FYR++EL D GG  AL E S   P LKNR
Sbjct: 7   VIRAKVGMLELARQLGNVSQACRVMGYSRDSFYRFKELYDKGGEAALQEISHHRPLLKNR 66

Query: 68  VEEAVEQAVMEYAIEFPAHGQHRTSNE-LRKKGVFVSGSGVRSIWLRHDLENFKKRLKAL 126
           V+  VE AV+E A+E PA+GQ R +NE L++  + VS  GVRSIWLRHDLE   KRLKAL
Sbjct: 67  VDPQVEAAVIELALELPAYGQIRIANEVLKRHALSVSPQGVRSIWLRHDLETMNKRLKAL 126

Query: 127 EAKVARDGIQLTDEQIAALERKKHDDEACGEIETAHPGYLGSQDTFYVGNLKGVGRIYQQ 186
           EAK A++G+ LT+ Q+ ALER K + E  GE E+  PGY G+QDTFYVG LKGVGR+YQQ
Sbjct: 127 EAKSAQEGLVLTESQLTALERAKLEKETHGEFESECPGYCGAQDTFYVGTLKGVGRVYQQ 186

Query: 187 TYVDTYCKVAHCKLYTTKTPITAADLLNDKVLPFYESQQLPVLRILTDRGTEYCGKVEHH 246
           T+VDTY KVA  KLY  KTP+ AADLLND+V+PF++   +P+ R+LTDRGTEYCG  EHH
Sbjct: 187 TFVDTYSKVAFAKLYDRKTPLPAADLLNDRVVPFFDGYGIPLARVLTDRGTEYCGNPEHH 246

Query: 247 DYQLYLAINDIDHTKTKAMSPQTNGICERFHKTILNEFYQVTFRKKLYQTLEELQKDLDE 306
           +Y+LYLA+ +IDHT+TKA SPQTNGI ER HKT+LNEFY++ FR+K+Y ++  L  DLD 
Sbjct: 247 EYELYLAVENIDHTRTKARSPQTNGIVERLHKTMLNEFYRIAFRRKIYDSIAALHTDLDA 306

Query: 307 WLSYYNNERTHQGKMCNGRTPVETLIDGKRVWAEK 341
           WL  YNNER HQG+ C G+TP+ T +D   +  EK
Sbjct: 307 WLDQYNNEREHQGRWCYGKTPMRTFLDSLELAREK 341